MGE detailed information
MGE type: Prophage MGE length: 27340 bp
Accession: NZ_CP023620 Location: 3549473..3576812 Organism: Mycobacterium tuberculosis strain LN1856 Replicon: chromosome
Accession: NZ_CP023620 Location: 3549473..3576812 Organism: Mycobacterium tuberculosis strain LN1856 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP476_RS17375 () | 3545229..3546089 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP476_RS17380 () | 3546064..3546579 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP476_RS17390 () | 3546819..3547112 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP476_RS17395 () | 3547400..3548689 | + | 1290 | WP_003906996.1 | ATP-binding protein | - |
| CP476_RS17400 () | 3549036..3549470 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP476_RS17405 () | 3549473..3549925 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP476_RS17410 () | 3550156..3550500 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP476_RS17415 () | 3550497..3550826 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP476_RS17420 () | 3551063..3552324 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP476_RS17425 () | 3552546..3553807 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP476_RS17430 () | 3554080..3554427 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP476_RS17435 () | 3554424..3555044 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP476_RS17440 () | 3555204..3556469 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CP476_RS17445 () | 3556637..3556846 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP476_RS17455 () | 3557093..3558127 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP476_RS17460 () | 3558411..3558635 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP476_RS17475 () | 3559342..3559806 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CP476_RS17480 () | 3559976..3562954 | - | 2979 | WP_070171108.1 | UPF0182 family protein | - |
| CP476_RS17485 () | 3563046..3564068 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP476_RS17490 () | 3564146..3565558 | + | 1413 | Protein_3307 | zinc-dependent metalloprotease | - |
| CP476_RS17495 () | 3565597..3566463 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP476_RS17500 () | 3566472..3566645 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP476_RS17505 () | 3566800..3568143 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP476_RS17510 () | 3568177..3568455 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP476_RS17515 () | 3568885..3570987 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP476_RS17520 () | 3571111..3571365 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP476_RS17525 () | 3571378..3572319 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP476_RS17530 () | 3572378..3573445 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP476_RS17535 () | 3573507..3576812 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP476_RS17540 () | 3576809..3579976 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP476_RS17545 () | 3580062..3580271 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP476_RS17550 () | 3580302..3581087 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP476_RS17555 () | 3581090..3581395 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.005 |