MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP023619 Location: 3794985..3801348 Organism: Mycobacterium tuberculosis strain LN1100 Replicon: chromosome
Accession: NZ_CP023619 Location: 3794985..3801348 Organism: Mycobacterium tuberculosis strain LN1100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP475_RS18475 () | 3790041..3790694 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| CP475_RS18480 () | 3790733..3792238 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| CP475_RS18485 () | 3792243..3793133 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| CP475_RS18490 () | 3793142..3794942 | - | 1801 | Protein_3497 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CP475_RS18505 () | 3796333..3797322 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CP475_RS18510 () | 3797322..3798374 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| CP475_RS18515 () | 3799128..3799520 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CP475_RS18520 () | 3799520..3799795 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CP475_RS18525 () | 3800007..3801348 | + | 1342 | Protein_3503 | ISNCY family transposase ISRjo3 | Transposase |
| CP475_RS18530 () | 3801538..3803733 | + | 2196 | WP_010886168.1 | PE family protein | - |
| CP475_RS18535 () | 3803804..3804676 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CP475_RS18540 () | 3804750..3805460 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |