MGE detailed information
MGE type: Prophage MGE length: 32878 bp
Accession: NZ_CP023619 Location: 3547555..3580432 Organism: Mycobacterium tuberculosis strain LN1100 Replicon: chromosome
Accession: NZ_CP023619 Location: 3547555..3580432 Organism: Mycobacterium tuberculosis strain LN1100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP475_RS17360 () | 3542797..3544284 | + | 1488 | WP_003416624.1 | amidase | - |
| CP475_RS17365 () | 3544281..3545237 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP475_RS17370 () | 3545384..3546244 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP475_RS17375 () | 3546219..3546734 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP475_RS17385 () | 3546974..3547267 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP475_RS17390 () | 3547555..3548844 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP475_RS17395 () | 3549191..3549625 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP475_RS17400 () | 3549628..3550080 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP475_RS17405 () | 3550311..3550655 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP475_RS17410 () | 3550652..3550981 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP475_RS17415 () | 3551218..3552479 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP475_RS17420 () | 3552701..3553962 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP475_RS17425 () | 3554235..3554582 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP475_RS17430 () | 3554579..3555199 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP475_RS17435 () | 3555359..3556624 | - | 1266 | WP_003899958.1 | hypothetical protein | - |
| CP475_RS17440 () | 3556792..3557001 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP475_RS17450 () | 3557248..3558282 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP475_RS17455 () | 3558566..3558790 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP475_RS17470 () | 3559500..3559961 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP475_RS17475 () | 3560131..3563109 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP475_RS17480 () | 3563201..3564223 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP475_RS17485 () | 3564301..3565719 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP475_RS17490 () | 3565758..3566624 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP475_RS17495 () | 3566633..3566806 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP475_RS17500 () | 3566961..3568304 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP475_RS17505 () | 3568338..3568616 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP475_RS17510 () | 3569046..3571148 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP475_RS17515 () | 3571272..3571526 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP475_RS17520 () | 3571539..3572480 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP475_RS17525 () | 3572539..3573606 | - | 1068 | WP_003900655.1 | potassium channel family protein | - |
| CP475_RS17530 () | 3573668..3576973 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP475_RS17535 () | 3576970..3580137 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP475_RS17540 () | 3580223..3580432 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP475_RS17545 () | 3580463..3581248 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP475_RS17550 () | 3581251..3581556 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP475_RS17555 () | 3581563..3582417 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP475_RS17560 () | 3582468..3583646 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP475_RS17565 () | 3583737..3584765 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0 |