MGE detailed information
MGE type: Prophage MGE length: 32878 bp
Accession: NZ_CP023615 Location: 3547494..3580371 Organism: Mycobacterium tuberculosis strain LN3589 Replicon: chromosome
Accession: NZ_CP023615 Location: 3547494..3580371 Organism: Mycobacterium tuberculosis strain LN3589 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP471_RS17355 () | 3542736..3544223 | + | 1488 | WP_003416624.1 | amidase | - |
| CP471_RS17360 () | 3544220..3545176 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP471_RS17365 () | 3545323..3546183 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP471_RS17370 () | 3546158..3546673 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP471_RS17380 () | 3546913..3547206 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP471_RS17385 () | 3547494..3548783 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP471_RS17390 () | 3549130..3549564 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP471_RS17395 () | 3549567..3550019 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP471_RS17400 () | 3550250..3550594 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP471_RS17405 () | 3550591..3550920 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP471_RS17410 () | 3551157..3552418 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP471_RS17415 () | 3552640..3553901 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP471_RS17420 () | 3554174..3554521 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP471_RS17425 () | 3554518..3555138 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP471_RS17430 () | 3555298..3556563 | - | 1266 | WP_003899958.1 | hypothetical protein | - |
| CP471_RS17435 () | 3556731..3556940 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP471_RS17445 () | 3557187..3558221 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP471_RS17450 () | 3558505..3558729 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP471_RS17465 () | 3559439..3559900 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP471_RS17470 () | 3560070..3563048 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP471_RS17475 () | 3563140..3564162 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP471_RS17480 () | 3564240..3565658 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP471_RS17485 () | 3565697..3566563 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP471_RS17490 () | 3566572..3566745 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP471_RS17495 () | 3566900..3568243 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP471_RS17500 () | 3568277..3568555 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP471_RS17505 () | 3568985..3571087 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP471_RS17510 () | 3571211..3571465 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP471_RS17515 () | 3571478..3572419 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP471_RS17520 () | 3572478..3573545 | - | 1068 | WP_003900655.1 | potassium channel family protein | - |
| CP471_RS17525 () | 3573607..3576912 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP471_RS17530 () | 3576909..3580076 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP471_RS17535 () | 3580162..3580371 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP471_RS17540 () | 3580402..3581187 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP471_RS17545 () | 3581190..3581495 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP471_RS17550 () | 3581502..3582356 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP471_RS17555 () | 3582407..3583585 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP471_RS17560 () | 3583676..3584704 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0 |