MGE detailed information
MGE type: Prophage MGE length: 32872 bp
Accession: NZ_CP023614 Location: 3547475..3580346 Organism: Mycobacterium tuberculosis strain LN3588 Replicon: chromosome
Accession: NZ_CP023614 Location: 3547475..3580346 Organism: Mycobacterium tuberculosis strain LN3588 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP470_RS17370 () | 3542717..3544204 | + | 1488 | WP_003416624.1 | amidase | - |
| CP470_RS17375 () | 3544201..3545157 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP470_RS17380 () | 3545304..3546164 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP470_RS17385 () | 3546139..3546654 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP470_RS17395 () | 3546894..3547187 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP470_RS17400 () | 3547475..3548764 | + | 1290 | WP_070171107.1 | ATP-binding protein | - |
| CP470_RS17405 () | 3549111..3549545 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP470_RS17410 () | 3549548..3550000 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP470_RS17415 () | 3550231..3550575 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP470_RS17420 () | 3550572..3550901 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP470_RS17425 () | 3551138..3552399 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP470_RS17430 () | 3552621..3553882 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP470_RS17435 () | 3554155..3554502 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP470_RS17440 () | 3554499..3555119 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP470_RS17445 () | 3555279..3556544 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CP470_RS17450 () | 3556712..3556921 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP470_RS21930 () | 3556956..3557141 | + | 186 | WP_003908177.1 | hypothetical protein | - |
| CP470_RS17460 () | 3557168..3558202 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP470_RS17465 () | 3558486..3558710 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP470_RS17480 () | 3559420..3559881 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP470_RS17485 () | 3560051..3563029 | - | 2979 | WP_070171108.1 | UPF0182 family protein | - |
| CP470_RS17490 () | 3563121..3564143 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP470_RS17495 () | 3564221..3565633 | + | 1413 | Protein_3306 | zinc-dependent metalloprotease | - |
| CP470_RS17500 () | 3565672..3566538 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP470_RS17505 () | 3566547..3566720 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP470_RS17510 () | 3566875..3568218 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP470_RS17515 () | 3568252..3568530 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP470_RS17520 () | 3568960..3571062 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP470_RS17525 () | 3571186..3571440 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP470_RS17530 () | 3571453..3572394 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP470_RS17535 () | 3572453..3573520 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP470_RS17540 () | 3573582..3576887 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP470_RS17545 () | 3576884..3580051 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP470_RS17550 () | 3580137..3580346 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP470_RS17555 () | 3580377..3581162 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP470_RS17560 () | 3581165..3581470 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP470_RS17565 () | 3581477..3582331 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP470_RS17570 () | 3582382..3583560 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP470_RS17575 () | 3583651..3584679 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0 |