MGE detailed information
MGE type: Prophage MGE length: 30805 bp
Accession: NZ_CP023610 Location: 3549550..3580354 Organism: Mycobacterium tuberculosis strain LN317 Replicon: chromosome
Accession: NZ_CP023610 Location: 3549550..3580354 Organism: Mycobacterium tuberculosis strain LN317 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP466_RS17375 () | 3545306..3546166 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP466_RS17380 () | 3546141..3546656 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP466_RS17390 () | 3546896..3547189 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP466_RS17395 () | 3547477..3548766 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP466_RS17400 () | 3549113..3549547 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP466_RS17405 () | 3549550..3550002 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP466_RS17410 () | 3550233..3550577 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP466_RS17415 () | 3550574..3550903 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP466_RS17420 () | 3551140..3552401 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP466_RS17425 () | 3552623..3553884 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP466_RS17430 () | 3554157..3554504 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP466_RS17435 () | 3554501..3555121 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP466_RS17440 () | 3555281..3556546 | - | 1266 | WP_096879495.1 | hypothetical protein | - |
| CP466_RS17445 () | 3556714..3556923 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP466_RS17455 () | 3557170..3558204 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP466_RS17460 () | 3558488..3558712 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP466_RS17475 () | 3559422..3559883 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP466_RS17480 () | 3560053..3563031 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP466_RS17485 () | 3563123..3564145 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP466_RS17490 () | 3564223..3565641 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP466_RS17495 () | 3565680..3566546 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP466_RS17500 () | 3566555..3566728 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP466_RS17505 () | 3566883..3568226 | + | 1344 | WP_096879496.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP466_RS17510 () | 3568260..3568538 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP466_RS17515 () | 3568968..3571070 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP466_RS17520 () | 3571194..3571448 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP466_RS17525 () | 3571461..3572402 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP466_RS17530 () | 3572461..3573528 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP466_RS17535 () | 3573590..3576895 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP466_RS17540 () | 3576892..3580059 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP466_RS17545 () | 3580145..3580354 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP466_RS17550 () | 3580385..3581170 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP466_RS17555 () | 3581173..3581478 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP466_RS17560 () | 3581485..3582339 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP466_RS17565 () | 3582390..3583568 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP466_RS17570 () | 3583659..3584687 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.002 |