MGE detailed information
MGE type: Prophage MGE length: 27346 bp
Accession: NZ_CP023609 Location: 3549436..3576781 Organism: Mycobacterium tuberculosis strain LN55 Replicon: chromosome
Accession: NZ_CP023609 Location: 3549436..3576781 Organism: Mycobacterium tuberculosis strain LN55 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP465_RS17375 () | 3545192..3546052 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP465_RS17380 () | 3546027..3546542 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP465_RS17390 () | 3546782..3547075 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP465_RS17395 () | 3547363..3548652 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP465_RS17400 () | 3548999..3549433 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP465_RS17405 () | 3549436..3549888 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP465_RS17410 () | 3550119..3550463 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP465_RS17415 () | 3550460..3550789 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP465_RS17420 () | 3551026..3552287 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP465_RS17425 () | 3552509..3553770 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP465_RS17430 () | 3554043..3554390 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP465_RS17435 () | 3554387..3555007 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP465_RS17440 () | 3555167..3556432 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CP465_RS17445 () | 3556600..3556809 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP465_RS17455 () | 3557056..3558090 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP465_RS17460 () | 3558374..3558598 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP465_RS17475 () | 3559308..3559769 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP465_RS17480 () | 3559939..3562917 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP465_RS17485 () | 3563009..3564031 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP465_RS17490 () | 3564109..3565527 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP465_RS17495 () | 3565566..3566432 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP465_RS17500 () | 3566441..3566614 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP465_RS17505 () | 3566769..3568112 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP465_RS17510 () | 3568146..3568424 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP465_RS17515 () | 3568854..3570956 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP465_RS17520 () | 3571080..3571334 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP465_RS17525 () | 3571347..3572288 | - | 942 | WP_003906027.1 | NAD(+) diphosphatase | - |
| CP465_RS17530 () | 3572347..3573414 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP465_RS17535 () | 3573476..3576781 | - | 3306 | WP_003910809.1 | ATP-dependent DNA helicase AdnB | - |
| CP465_RS17540 () | 3576778..3579945 | - | 3168 | WP_003901568.1 | ATP-dependent DNA helicase AdnA | - |
| CP465_RS17545 () | 3580031..3580240 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP465_RS17550 () | 3580271..3581056 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP465_RS17555 () | 3581059..3581364 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.005 |