MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP023604 Location: 3794818..3801181 Organism: Mycobacterium tuberculosis strain LE76 Replicon: chromosome
Accession: NZ_CP023604 Location: 3794818..3801181 Organism: Mycobacterium tuberculosis strain LE76 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP460_RS18490 () | 3789874..3790527 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| CP460_RS18495 () | 3790566..3792071 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| CP460_RS18500 () | 3792076..3792966 | - | 891 | WP_070890803.1 | diterpene synthase | - |
| CP460_RS18505 () | 3792975..3794775 | - | 1801 | Protein_3493 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CP460_RS18520 () | 3796166..3797155 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CP460_RS18525 () | 3797155..3798207 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| CP460_RS18530 () | 3798961..3799353 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CP460_RS18535 () | 3799353..3799628 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CP460_RS18540 () | 3799840..3801181 | + | 1342 | Protein_3499 | ISNCY family transposase ISRjo3 | Transposase |
| CP460_RS18545 () | 3801371..3803557 | + | 2187 | WP_050176331.1 | PE family protein | - |
| CP460_RS18550 () | 3803628..3804500 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CP460_RS18555 () | 3804574..3805284 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |