MGE detailed information
MGE type: Prophage MGE length: 29419 bp
Accession: NZ_CP023604 Location: 3547337..3576755 Organism: Mycobacterium tuberculosis strain LE76 Replicon: chromosome
Accession: NZ_CP023604 Location: 3547337..3576755 Organism: Mycobacterium tuberculosis strain LE76 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP460_RS17375 () | 3542579..3544066 | + | 1488 | WP_003416624.1 | amidase | - |
| CP460_RS17380 () | 3544063..3545019 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP460_RS17385 () | 3545166..3546026 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP460_RS17390 () | 3546001..3546516 | + | 516 | WP_198403574.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP460_RS17400 () | 3546756..3547049 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP460_RS17405 () | 3547337..3548626 | + | 1290 | WP_003906996.1 | ATP-binding protein | - |
| CP460_RS17410 () | 3548973..3549407 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP460_RS17415 () | 3549410..3549862 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP460_RS17420 () | 3550093..3550437 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP460_RS17425 () | 3550434..3550763 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP460_RS17430 () | 3551000..3552261 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP460_RS17435 () | 3552483..3553744 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP460_RS17440 () | 3554017..3554364 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP460_RS17445 () | 3554361..3554981 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP460_RS17450 () | 3555141..3556406 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CP460_RS17455 () | 3556574..3556783 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP460_RS17465 () | 3557030..3558064 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP460_RS17470 () | 3558348..3558572 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP460_RS17485 () | 3559279..3559743 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CP460_RS17490 () | 3559913..3562891 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP460_RS17495 () | 3562983..3564005 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP460_RS17500 () | 3564083..3565501 | + | 1419 | WP_009938632.1 | zinc-dependent metalloprotease | - |
| CP460_RS17505 () | 3565540..3566406 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP460_RS17510 () | 3566415..3566588 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP460_RS17515 () | 3566743..3568086 | + | 1344 | WP_070890800.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP460_RS17520 () | 3568120..3568398 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP460_RS17525 () | 3568828..3570930 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP460_RS17530 () | 3571054..3571308 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP460_RS17535 () | 3571321..3572262 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP460_RS17540 () | 3572321..3573388 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP460_RS17545 () | 3573450..3576755 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP460_RS17550 () | 3576752..3579919 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP460_RS17555 () | 3580005..3580214 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP460_RS17560 () | 3580245..3581030 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP460_RS17565 () | 3581033..3581338 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.003 |