MGE detailed information
MGE type: Prophage MGE length: 30805 bp
Accession: NZ_CP023597 Location: 3549625..3580429 Organism: Mycobacterium tuberculosis strain SLM088 Replicon: chromosome
Accession: NZ_CP023597 Location: 3549625..3580429 Organism: Mycobacterium tuberculosis strain SLM088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP453_RS17375 () | 3545381..3546241 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP453_RS17380 () | 3546216..3546731 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP453_RS17390 () | 3546971..3547264 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP453_RS17395 () | 3547552..3548841 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP453_RS17400 () | 3549188..3549622 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP453_RS17405 () | 3549625..3550077 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP453_RS17410 () | 3550308..3550652 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP453_RS17415 () | 3550649..3550978 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP453_RS17420 () | 3551215..3552476 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP453_RS17425 () | 3552698..3553959 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP453_RS17430 () | 3554232..3554579 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP453_RS17435 () | 3554576..3555196 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP453_RS17440 () | 3555356..3556621 | - | 1266 | WP_003899958.1 | hypothetical protein | - |
| CP453_RS17445 () | 3556789..3556998 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP453_RS17455 () | 3557245..3558279 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP453_RS17460 () | 3558563..3558787 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP453_RS17475 () | 3559494..3559958 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CP453_RS17480 () | 3560128..3563106 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP453_RS17485 () | 3563198..3564220 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP453_RS17490 () | 3564298..3565716 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP453_RS17495 () | 3565755..3566621 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP453_RS17500 () | 3566630..3566803 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP453_RS17505 () | 3566958..3568301 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP453_RS17510 () | 3568335..3568613 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP453_RS17515 () | 3569043..3571145 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP453_RS17520 () | 3571269..3571523 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP453_RS17525 () | 3571536..3572477 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP453_RS17530 () | 3572536..3573603 | - | 1068 | WP_003900655.1 | potassium channel family protein | - |
| CP453_RS17535 () | 3573665..3576970 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP453_RS17540 () | 3576967..3580134 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP453_RS17545 () | 3580220..3580429 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP453_RS17550 () | 3580460..3581245 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP453_RS17555 () | 3581248..3581553 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP453_RS17560 () | 3581560..3582414 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP453_RS17565 () | 3582465..3583643 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP453_RS17570 () | 3583734..3584762 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.002 |