MGE detailed information
MGE type: Prophage MGE length: 30219 bp
Accession: NZ_CP023588 Location: 3546475..3576693 Organism: Mycobacterium tuberculosis strain TBDM425 Replicon: chromosome
Accession: NZ_CP023588 Location: 3546475..3576693 Organism: Mycobacterium tuberculosis strain TBDM425 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP444_RS17360 () | 3541795..3542502 | + | 708 | WP_009938629.1 | SDR family oxidoreductase | - |
| CP444_RS17365 () | 3542517..3544004 | + | 1488 | WP_003416624.1 | amidase | - |
| CP444_RS17370 () | 3544001..3544957 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP444_RS17375 () | 3545104..3545964 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP444_RS17380 () | 3545939..3546454 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP444_RS17385 () | 3546470..3546681 | + | 212 | Protein_3290 | (R)-hydratase | - |
| CP444_RS17390 () | 3546694..3546987 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP444_RS17395 () | 3547275..3548564 | + | 1290 | WP_003906996.1 | ATP-binding protein | - |
| CP444_RS17400 () | 3548911..3549345 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP444_RS17405 () | 3549348..3549800 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP444_RS17410 () | 3550031..3550375 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP444_RS17415 () | 3550372..3550701 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP444_RS17420 () | 3550938..3552199 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP444_RS17425 () | 3552421..3553682 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP444_RS17430 () | 3553955..3554302 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP444_RS17435 () | 3554299..3554919 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP444_RS17440 () | 3555079..3556344 | - | 1266 | WP_023641391.1 | hypothetical protein | - |
| CP444_RS17445 () | 3556512..3556721 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP444_RS17455 () | 3556968..3558002 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP444_RS17460 () | 3558286..3558510 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP444_RS17475 () | 3559217..3559681 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CP444_RS17480 () | 3559851..3562829 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP444_RS17485 () | 3562921..3563943 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP444_RS17490 () | 3564021..3565439 | + | 1419 | WP_009938632.1 | zinc-dependent metalloprotease | - |
| CP444_RS17495 () | 3565478..3566344 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP444_RS17500 () | 3566353..3566526 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP444_RS17505 () | 3566681..3568024 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP444_RS17510 () | 3568058..3568336 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP444_RS17515 () | 3568766..3570868 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP444_RS17520 () | 3570992..3571246 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP444_RS17525 () | 3571259..3572200 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP444_RS17530 () | 3572259..3573326 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP444_RS17535 () | 3573388..3576693 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP444_RS17540 () | 3576690..3579857 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP444_RS17545 () | 3579943..3580152 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP444_RS17550 () | 3580183..3580968 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP444_RS17555 () | 3580971..3581276 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.004 |