MGE detailed information
MGE type: Prophage MGE length: 30805 bp
Accession: NZ_CP023580 Location: 3549619..3580423 Organism: Mycobacterium tuberculosis strain LN180 Replicon: chromosome
Accession: NZ_CP023580 Location: 3549619..3580423 Organism: Mycobacterium tuberculosis strain LN180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP436_RS17365 () | 3545375..3546235 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP436_RS17370 () | 3546210..3546725 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP436_RS17380 () | 3546965..3547258 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP436_RS17385 () | 3547546..3548835 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP436_RS17390 () | 3549182..3549616 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP436_RS17395 () | 3549619..3550071 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP436_RS17400 () | 3550302..3550646 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP436_RS17405 () | 3550643..3550972 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP436_RS17410 () | 3551209..3552470 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP436_RS17415 () | 3552692..3553953 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP436_RS17420 () | 3554226..3554573 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP436_RS17425 () | 3554570..3555190 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP436_RS17430 () | 3555350..3556615 | - | 1266 | WP_003899958.1 | hypothetical protein | - |
| CP436_RS17435 () | 3556783..3556992 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP436_RS17445 () | 3557239..3558273 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP436_RS17450 () | 3558557..3558781 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP436_RS17465 () | 3559491..3559952 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP436_RS17470 () | 3560122..3563100 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP436_RS17475 () | 3563192..3564214 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP436_RS17480 () | 3564292..3565710 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP436_RS17485 () | 3565749..3566615 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP436_RS17490 () | 3566624..3566797 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP436_RS17495 () | 3566952..3568295 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP436_RS17500 () | 3568329..3568607 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP436_RS17505 () | 3569037..3571139 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP436_RS17510 () | 3571263..3571517 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP436_RS17515 () | 3571530..3572471 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP436_RS17520 () | 3572530..3573597 | - | 1068 | WP_003900655.1 | potassium channel family protein | - |
| CP436_RS17525 () | 3573659..3576964 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP436_RS17530 () | 3576961..3580128 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP436_RS17535 () | 3580214..3580423 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP436_RS17540 () | 3580454..3581239 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP436_RS17545 () | 3581242..3581547 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP436_RS17550 () | 3581554..3582408 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP436_RS17555 () | 3582459..3583637 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP436_RS17560 () | 3583728..3584756 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.002 |