MGE detailed information
MGE type: Conjugative plasmid MGE length: 108679 bp
Accession: NZ_CP023534 Location: 1..108679 Organism: Escherichia coli strain FDAARGOS_403 Replicon: plasmid unnamed1
Accession: NZ_CP023534 Location: 1..108679 Organism: Escherichia coli strain FDAARGOS_403 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO706_RS29675 () | 667..1488 | + | 822 | WP_185762498.1 | hypothetical protein | - |
| CO706_RS00645 () | 1488..1740 | + | 253 | Protein_2 | PilI type IV pilus biogenesis protein | - |
| CO706_RS00660 () | 2784..3851 | + | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| CO706_RS00665 () | 3851..4288 | + | 438 | WP_000539806.1 | type IV pilus biogenesis protein PilM | - |
| CO706_RS00670 () | 4302..5984 | + | 1683 | WP_000748144.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CO706_RS00675 () | 5977..7272 | + | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| CO706_RS00680 () | 7259..7711 | + | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| CO706_RS00685 () | 7722..9274 | + | 1553 | Protein_8 | Flp pilus assembly complex ATPase component TadA | - |
| CO706_RS00690 () | 9287..10372 | + | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| CO706_RS00695 () | 10389..11003 | + | 615 | WP_000908227.1 | type IV prepilin | - |
| CO706_RS00700 () | 11013..11573 | + | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| CO706_RS00705 () | 11558..12214 | + | 657 | WP_001193549.1 | prepilin peptidase | - |
| CO706_RS00710 () | 12214..13506 | + | 1293 | WP_001390622.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CO706_RS00735 () | 14631..14807 | - | 177 | WP_096040819.1 | shufflon protein C' | - |
| CO706_RS00745 () | 15258..16411 | + | 1154 | Protein_15 | integrase | - |
| CO706_RS00750 () | 16562..17386 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| CO706_RS00755 () | 17472..18674 | + | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| CO706_RS00760 () | 18734..19318 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CO706_RS00765 () | 19713..20171 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CO706_RS00770 () | 20168..20986 | + | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| CO706_RS00775 () | 20983..22131 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| CO706_RS00780 () | 22128..22418 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| CO706_RS00785 () | 22433..22984 | + | 552 | WP_000014586.1 | phospholipase D family protein | - |
| CO706_RS00790 () | 23074..26838 | + | 3765 | WP_001141540.1 | DNA primase | - |
| CO706_RS00795 () | 26856..27203 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CO706_RS00800 () | 27200..27892 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CO706_RS00805 () | 27903..28886 | + | 984 | WP_001191879.1 | IncI1-type conjugal transfer protein TraN | - |
| CO706_RS00810 () | 28889..30178 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| CO706_RS00815 () | 30178..30882 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CO706_RS00820 () | 30882..31409 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CO706_RS00825 () | 31460..31864 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| CO706_RS00830 () | 31928..32116 | + | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| CO706_RS00835 () | 32100..32900 | + | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| CO706_RS00840 () | 32990..36034 | + | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| CO706_RS00845 () | 36034..36648 | + | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| CO706_RS00850 () | 36615..37817 | + | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| CO706_RS00855 () | 37846..38430 | + | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| CO706_RS00860 () | 38527..40695 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| CO706_RS00865 () | 40771..41385 | + | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CO706_RS00870 () | 41483..41692 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| CO706_RS29680 () | 41875..42051 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| CO706_RS00875 () | 42116..42412 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| CO706_RS00880 () | 42712..42963 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| CO706_RS00885 () | 43035..43187 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 43237..43299 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43237..43299 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43237..43299 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43237..43299 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| CO706_RS00890 () | 43502..44593 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| CO706_RS00895 () | 44900..46108 | + | 1209 | WP_000121263.1 | IncI1-type conjugal transfer protein TrbA | - |
| CO706_RS00900 () | 46127..47197 | + | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| CO706_RS00905 () | 47190..49481 | + | 2292 | WP_001289278.1 | conjugal transfer protein TrbC | - |
| CO706_RS00910 () | 49518..52217 | - | 2700 | WP_001387486.1 | IncI1-type relaxase NikB | - |
| CO706_RS00915 () | 52228..52560 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CO706_RS00920 () | 52794..53129 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CO706_RS00925 () | 53216..54064 | - | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| CO706_RS00935 () | 54413..54610 | + | 198 | WP_001161107.1 | hypothetical protein | - |
| CO706_RS00940 () | 54644..54895 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CO706_RS00945 () | 54926..55132 | - | 207 | WP_000150314.1 | hypothetical protein | - |
| CO706_RS00950 () | 55194..56108 | - | 915 | WP_000038348.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CO706_RS00955 () | 56105..56494 | - | 390 | WP_000833766.1 | hypothetical protein | - |
| CO706_RS00960 () | 56671..56937 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| CO706_RS00965 () | 57031..57465 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| CO706_RS00980 () | 58194..58694 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| CO706_RS00990 () | 59156..59752 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| CO706_RS00995 () | 59749..60468 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| CO706_RS01000 () | 60465..60899 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| CO706_RS01005 () | 60954..62912 | - | 1959 | WP_001145488.1 | ParB/RepB/Spo0J family partition protein | - |
| CO706_RS01010 () | 62971..63204 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CO706_RS01015 () | 63262..63789 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CO706_RS29085 () | 64173..64544 | - | 372 | WP_001392076.1 | hypothetical protein | - |
| CO706_RS01025 () | 64558..64749 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| CO706_RS01030 () | 64746..65168 | - | 423 | WP_000271745.1 | DUF1380 family protein | - |
| CO706_RS01035 () | 65215..65517 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CO706_RS29685 () | 66054..66830 | - | 777 | WP_001005022.1 | hypothetical protein | - |
| CO706_RS01050 () | 66876..67310 | - | 435 | WP_000274412.1 | DUF1380 family protein | - |
| CO706_RS01055 () | 67324..67545 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| CO706_RS01060 () | 67546..68229 | - | 684 | WP_000086153.1 | DNA methylase | - |
| CO706_RS01065 () | 68306..68617 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| CO706_RS01070 () | 68614..69516 | - | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| CO706_RS01080 () | 69935..70183 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CO706_RS01085 () | 70180..70617 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CO706_RS01090 () | 70617..71888 | + | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| CO706_RS01095 () | 72092..72718 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CO706_RS29690 () | 72715..73017 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| CO706_RS01105 () | 73286..74146 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| CO706_RS01110 () | 74329..74886 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| CO706_RS01115 () | 75050..75244 | + | 195 | Protein_84 | DUF4158 domain-containing protein | - |
| CO706_RS01120 () | 75450..76712 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| CO706_RS01125 () | 76968..77843 | + | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| CO706_RS01130 () | 77890..78222 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CO706_RS01135 () | 78236..81031 | + | 2796 | Protein_88 | Tn3-like element Tn3 family transposase | - |
| CO706_RS01145 () | 81519..82865 | - | 1347 | WP_001132021.1 | hypothetical protein | - |
| CO706_RS01155 () | 83218..83820 | + | 603 | WP_000517687.1 | hypothetical protein | - |
| CO706_RS01160 () | 83876..84385 | + | 510 | WP_000045395.1 | hypothetical protein | - |
| CO706_RS01180 () | 85455..86486 | - | 1032 | WP_000907869.1 | replication initiation protein | - |
| CO706_RS01195 () | 87459..87722 | + | 264 | WP_001387472.1 | ash family protein | - |
| CO706_RS01200 () | 87640..87927 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| CO706_RS01210 () | 88369..88902 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CO706_RS01220 () | 89156..89839 | + | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| CO706_RS01225 () | 90011..90265 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CO706_RS01245 () | 91312..92378 | + | 1067 | Protein_98 | type IV pilus biogenesis lipoprotein PilL | - |
| CO706_RS01250 () | 92378..92815 | + | 438 | WP_000539806.1 | type IV pilus biogenesis protein PilM | - |
| CO706_RS01255 () | 92829..94511 | + | 1683 | WP_000748144.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CO706_RS01260 () | 94504..95799 | + | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| CO706_RS01265 () | 95786..96238 | + | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| CO706_RS01270 () | 96249..97802 | + | 1554 | WP_000362206.1 | Flp pilus assembly complex ATPase component TadA | - |
| CO706_RS01275 () | 97815..98900 | + | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| CO706_RS01280 () | 98917..99531 | + | 615 | WP_000908227.1 | type IV prepilin | - |
| CO706_RS01285 () | 99541..100101 | + | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| CO706_RS01290 () | 100086..100742 | + | 657 | WP_001193549.1 | prepilin peptidase | - |
| CO706_RS01295 () | 100742..102112 | + | 1371 | WP_001405478.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CO706_RS29105 () | 103281..103529 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| CO706_RS01325 () | 103794..104948 | + | 1155 | WP_001139956.1 | integrase | - |
| CO706_RS01330 () | 105099..105923 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| CO706_RS01335 () | 105992..107207 | + | 1216 | Protein_112 | conjugal transfer protein TraF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|