MGE detailed information
MGE type: Prophage MGE length: 60325 bp
Accession: NZ_CP023531 Location: 2062752..2123076 Organism: Escherichia coli strain FDAARGOS_401 Replicon: chromosome
Accession: NZ_CP023531 Location: 2062752..2123076 Organism: Escherichia coli strain FDAARGOS_401 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO703_RS11385 () | 2058362..2059003 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| CO703_RS11390 () | 2059007..2060377 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| CO703_RS11395 () | 2060545..2061216 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| CO703_RS11400 () | 2061216..2062676 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| CO703_RS11405 () | 2062752..2063873 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| CO703_RS11410 () | 2064019..2065248 | - | 1230 | WP_000359463.1 | peptidase T | - |
| CO703_RS11420 () | 2065498..2066634 | + | 1137 | WP_000531594.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CO703_RS11425 () | 2066618..2067481 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CO703_RS11430 () | 2067713..2068294 | - | 582 | WP_000885609.1 | tail fiber assembly protein | - |
| CO703_RS11435 () | 2068294..2071086 | - | 2793 | WP_000279201.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CO703_RS11440 () | 2071151..2071750 | - | 600 | WP_001233150.1 | hypothetical protein | VF |
| CO703_RS11445 () | 2071818..2075291 | - | 3474 | WP_000515046.1 | host specificity protein J | - |
| CO703_RS11450 () | 2075532..2076164 | - | 633 | WP_123001620.1 | tail assembly protein | - |
| CO703_RS11455 () | 2076110..2076853 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| CO703_RS11460 () | 2076864..2077562 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| CO703_RS11465 () | 2077562..2077891 | - | 330 | WP_000847306.1 | phage tail protein | - |
| CO703_RS11470 () | 2077888..2080500 | - | 2613 | WP_000081807.1 | phage tail tape measure protein | - |
| CO703_RS11475 () | 2080481..2080894 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| CO703_RS11480 () | 2080921..2081343 | - | 423 | WP_000479049.1 | phage minor tail protein G | - |
| CO703_RS11485 () | 2081357..2082109 | - | 753 | WP_000235035.1 | phage tail protein | - |
| CO703_RS11490 () | 2082117..2082512 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| CO703_RS11495 () | 2082509..2083084 | - | 576 | WP_000975003.1 | phage tail protein | - |
| CO703_RS11500 () | 2083100..2083453 | - | 354 | WP_001204567.1 | tail attachment protein | - |
| CO703_RS11505 () | 2083446..2083814 | - | 369 | WP_001390684.1 | hypothetical protein | - |
| CO703_RS11510 () | 2083867..2084895 | - | 1029 | WP_000522644.1 | major capsid protein | - |
| CO703_RS11515 () | 2084953..2085300 | - | 348 | WP_000256795.1 | head decoration protein | - |
| CO703_RS11520 () | 2085337..2086842 | - | 1506 | WP_001254006.1 | S49 family peptidase | - |
| CO703_RS11525 () | 2086832..2088423 | - | 1592 | Protein_2030 | phage portal protein | - |
| CO703_RS11530 () | 2088420..2088626 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| CO703_RS11535 () | 2088610..2090538 | - | 1929 | WP_001402639.1 | phage terminase large subunit family protein | - |
| CO703_RS11540 () | 2090510..2091019 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| CO703_RS11545 () | 2091421..2091606 | + | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| CO703_RS11550 () | 2091739..2091879 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| CO703_RS11555 () | 2092230..2092697 | - | 468 | WP_001082546.1 | lysis protein | - |
| CO703_RS11560 () | 2092996..2093529 | - | 534 | WP_001092864.1 | lysozyme | - |
| CO703_RS11565 () | 2093572..2094378 | - | 807 | WP_000731195.1 | YdfR family protein | - |
| CO703_RS11570 () | 2094383..2094598 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| CO703_RS11575 () | 2094749..2096602 | - | 1854 | WP_021519714.1 | SASA family carbohydrate esterase | - |
| CO703_RS11595 () | 2097392..2098441 | - | 1050 | WP_000935531.1 | site-specific DNA-methyltransferase | - |
| CO703_RS11600 () | 2098592..2098789 | - | 198 | WP_000917749.1 | hypothetical protein | - |
| CO703_RS11605 () | 2099016..2099837 | - | 822 | WP_000762898.1 | antitermination protein | - |
| CO703_RS11610 () | 2099834..2100208 | - | 375 | WP_000904113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CO703_RS11615 () | 2100221..2101270 | - | 1050 | WP_001265094.1 | DUF968 domain-containing protein | - |
| CO703_RS11620 () | 2101272..2101550 | - | 279 | WP_001341382.1 | hypothetical protein | - |
| CO703_RS11630 () | 2101718..2101873 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CO703_RS29465 () | 2102482..2102798 | - | 317 | Protein_2048 | hypothetical protein | - |
| CO703_RS29250 () | 2102795..2102971 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| CO703_RS11645 () | 2102964..2103146 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| CO703_RS11650 () | 2103240..2103596 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| CO703_RS29255 () | 2103574..2103717 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| CO703_RS11655 () | 2103728..2103991 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| CO703_RS11660 () | 2104125..2104400 | - | 276 | Protein_2054 | hypothetical protein | - |
| CO703_RS28840 () | 2104734..2104912 | - | 179 | Protein_2055 | hypothetical protein | - |
| CO703_RS11670 () | 2104914..2105663 | - | 750 | WP_001289900.1 | ead/Ea22-like family protein | - |
| CO703_RS11675 () | 2105660..2106346 | - | 687 | WP_000034251.1 | ead/Ea22-like family protein | - |
| CO703_RS11680 () | 2106333..2106827 | - | 495 | WP_001275731.1 | class I SAM-dependent methyltransferase | - |
| CO703_RS11685 () | 2106824..2107246 | - | 423 | WP_000416574.1 | DUF977 family protein | - |
| CO703_RS11690 () | 2107287..2108249 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| CO703_RS11695 () | 2108272..2108697 | - | 426 | WP_000693845.1 | Rha family transcriptional regulator | - |
| CO703_RS11700 () | 2108681..2108956 | - | 276 | WP_001048458.1 | helix-turn-helix domain-containing protein | - |
| CO703_RS11705 () | 2109064..2109564 | + | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| CO703_RS11710 () | 2109582..2109773 | + | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| CO703_RS11715 () | 2109773..2110063 | + | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO703_RS11725 () | 2110333..2110485 | + | 153 | WP_000379548.1 | DUF1391 family protein | - |
| CO703_RS11730 () | 2110497..2110835 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| CO703_RS11735 () | 2110824..2111090 | - | 267 | WP_012601410.1 | hypothetical protein | - |
| CO703_RS11745 () | 2111585..2111773 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| CO703_RS11750 () | 2111770..2111958 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| CO703_RS11755 () | 2112051..2114489 | + | 2439 | WP_000102130.1 | exonuclease | - |
| CO703_RS11760 () | 2114551..2114820 | + | 270 | WP_000003742.1 | excisionase | - |
| CO703_RS11765 () | 2114789..2115907 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| CO703_RS11770 () | 2116074..2116868 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CO703_RS11775 () | 2116865..2117911 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CO703_RS11780 () | 2117969..2118430 | + | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| CO703_RS11785 () | 2118427..2119215 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| CO703_RS11790 () | 2119354..2120175 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| CO703_RS11795 () | 2120191..2121102 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| CO703_RS11800 () | 2121131..2122375 | - | 1245 | WP_001251389.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CO703_RS11805 () | 2122375..2123076 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CO703_RS11810 () | 2123069..2124268 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CO703_RS11815 () | 2124530..2125603 | + | 1074 | WP_000810253.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|