MGE detailed information
MGE type: Genomic_island MGE length: 15371 bp
Accession: NZ_CP023484 Location: 3549092..3564462 Organism: Dickeya sp. Secpp 1600 Replicon: chromosome
Accession: NZ_CP023484 Location: 3549092..3564462 Organism: Dickeya sp. Secpp 1600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA59_RS15685 () | 3544294..3545154 | + | 861 | WP_107759984.1 | D-amino-acid transaminase | - |
| CPA59_RS15690 () | 3545248..3547692 | - | 2445 | WP_107759986.1 | mechanosensitive ion channel family protein | - |
| CPA59_RS15700 () | 3548337..3549445 | + | 1109 | Protein_3031 | IS3 family transposase | - |
| CPA59_RS15710 () | 3549639..3551210 | - | 1572 | WP_049842570.1 | DUF2235 domain-containing protein | - |
| CPA59_RS15715 () | 3551394..3551624 | + | 231 | WP_038919728.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CPA59_RS15720 () | 3551624..3552028 | + | 405 | WP_038919729.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CPA59_RS15725 () | 3552053..3553047 | - | 995 | Protein_3035 | IS3 family transposase | - |
| CPA59_RS15730 () | 3553114..3554136 | + | 1023 | WP_100848778.1 | IS110 family transposase | - |
| CPA59_RS15735 () | 3554355..3554471 | - | 117 | Protein_3037 | transposase | - |
| CPA59_RS15740 () | 3554824..3558069 | - | 3246 | WP_107759988.1 | DEAD/DEAH box helicase | - |
| CPA59_RS15745 () | 3558069..3559754 | - | 1686 | WP_107759990.1 | hypothetical protein | - |
| CPA59_RS15750 () | 3559751..3560494 | - | 744 | WP_038919733.1 | OmpA family protein | - |
| CPA59_RS15755 () | 3560508..3562697 | - | 2190 | WP_039691059.1 | anti-phage defense ZorAB system ZorA | - |
| CPA59_RS22920 () | 3563231..3563386 | - | 156 | WP_157987367.1 | hypothetical protein | - |
| CPA59_RS15760 () | 3563629..3564501 | - | 873 | WP_107759992.1 | HNH endonuclease | - |
| CPA59_RS15765 () | 3564830..3565774 | - | 945 | WP_107759993.1 | LysR family transcriptional regulator | - |
| CPA59_RS15770 () | 3565895..3567334 | + | 1440 | WP_107759995.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CPA59_RS15775 () | 3567376..3567708 | + | 333 | WP_038667222.1 | carboxymuconolactone decarboxylase family protein | - |
| CPA59_RS15780 () | 3567779..3568759 | + | 981 | WP_107759997.1 | NAD(P)H-quinone oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|