MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16284 bp
Accession: NZ_CP023484 Location: 1006319..1022602 Organism: Dickeya sp. Secpp 1600 Replicon: chromosome
Accession: NZ_CP023484 Location: 1006319..1022602 Organism: Dickeya sp. Secpp 1600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA59_RS04575 () | 1001726..1002532 | + | 807 | WP_107758783.1 | oxidoreductase | - |
| CPA59_RS04580 () | 1002771..1003138 | + | 368 | Protein_876 | GNAT family N-acetyltransferase | - |
| CPA59_RS04585 () | 1003376..1004518 | + | 1143 | WP_107758784.1 | Fic family protein | - |
| CPA59_RS22820 () | 1004541..1004651 | - | 111 | Protein_878 | IS3 family transposase | - |
| CPA59_RS04590 () | 1004783..1005097 | - | 315 | WP_049854443.1 | CcdB family protein | - |
| CPA59_RS04595 () | 1005078..1005296 | - | 219 | Protein_880 | type II toxin-antitoxin system CcdA family antitoxin | - |
| CPA59_RS04600 () | 1005311..1005559 | - | 249 | WP_039691666.1 | helix-turn-helix domain-containing protein | - |
| CPA59_RS04605 () | 1005644..1005898 | - | 255 | WP_049854491.1 | helix-turn-helix domain-containing protein | - |
| CPA59_RS04610 () | 1006004..1006246 | + | 243 | WP_107758785.1 | helix-turn-helix domain-containing protein | - |
| CPA59_RS04615 () | 1006570..1006794 | + | 225 | WP_107758786.1 | DUF1778 domain-containing protein | - |
| CPA59_RS04620 () | 1006912..1008036 | + | 1125 | WP_038918036.1 | site-specific integrase | - |
| CPA59_RS04625 () | 1008288..1010279 | + | 1992 | WP_107758787.1 | site-specific DNA-methyltransferase | - |
| CPA59_RS04630 () | 1010279..1013275 | + | 2997 | WP_107758788.1 | DEAD/DEAH box helicase family protein | - |
| CPA59_RS04635 () | 1013369..1016002 | - | 2634 | WP_107758789.1 | DEAD/DEAH box helicase family protein | - |
| CPA59_RS04640 () | 1015993..1017719 | - | 1727 | Protein_889 | site-specific DNA-methyltransferase | - |
| CPA59_RS04645 () | 1018149..1018454 | - | 306 | WP_107758790.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CPA59_RS04650 () | 1018457..1018675 | - | 219 | WP_038918044.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CPA59_RS04655 () | 1018734..1019477 | - | 744 | WP_107758791.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CPA59_RS04665 () | 1020380..1020721 | - | 342 | WP_107758793.1 | hypothetical protein | - |
| CPA59_RS22970 () | 1020862..1021032 | + | 171 | WP_162847981.1 | hypothetical protein | - |
| CPA59_RS04670 () | 1021174..1022421 | - | 1248 | WP_107758794.1 | tyrosine-type recombinase/integrase | - |
| CPA59_RS04680 () | 1023324..1025477 | + | 2154 | WP_107758795.1 | ornithine decarboxylase | - |
| CPA59_RS04685 () | 1025551..1027008 | - | 1458 | WP_038918049.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|