MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41743 bp
Accession: NZ_CP023449 Location: 3793286..3835028 Organism: Rhizorhabdus dicambivorans strain Ndbn-20 Replicon: chromosome
Accession: NZ_CP023449 Location: 3793286..3835028 Organism: Rhizorhabdus dicambivorans strain Ndbn-20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CMV14_RS17815 () | 3788607..3790394 | + | 1788 | WP_066969849.1 | hypothetical protein | - |
| CMV14_RS17820 () | 3790407..3792509 | + | 2103 | WP_066969847.1 | FkbM family methyltransferase | - |
| CMV14_RS17825 () | 3792518..3793525 | + | 1008 | WP_066969844.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| CMV14_RS17830 () | 3793572..3794198 | + | 627 | WP_083216168.1 | hypothetical protein | - |
| CMV14_RS17835 () | 3794317..3795558 | + | 1242 | WP_066969840.1 | hypothetical protein ; Integrase | Integrase |
| CMV14_RS17840 () | 3795597..3795926 | + | 330 | WP_176488992.1 | hypothetical protein | - |
| CMV14_RS17845 () | 3796050..3796850 | - | 801 | WP_066970386.1 | IS21 family transposase ISFlsp1 | Transposase |
| CMV14_RS17850 () | 3796862..3798382 | - | 1521 | WP_096367681.1 | IS21 family transposase ISFlsp1 | Transposase |
| CMV14_RS17860 () | 3798654..3799550 | - | 897 | WP_066970311.1 | 3'-5' exonuclease | - |
| CMV14_RS17865 () | 3799578..3801404 | - | 1827 | WP_066970308.1 | ATP-dependent helicase | - |
| CMV14_RS17870 () | 3801416..3803218 | - | 1803 | WP_066970305.1 | AAA family ATPase | - |
| CMV14_RS17875 () | 3803233..3804249 | - | 1017 | WP_066970302.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CMV14_RS17880 () | 3804242..3804835 | - | 594 | WP_066970298.1 | hypothetical protein | - |
| CMV14_RS17885 () | 3805079..3805855 | + | 777 | WP_096367784.1 | DUF1738 domain-containing protein | - |
| CMV14_RS17890 () | 3806013..3807362 | + | 1350 | WP_096367745.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CMV14_RS17895 () | 3807359..3809146 | + | 1788 | WP_066970282.1 | hypothetical protein | - |
| CMV14_RS17900 () | 3809143..3811305 | + | 2163 | WP_066970285.1 | integrase | - |
| CMV14_RS17905 () | 3811475..3812338 | + | 864 | WP_066970288.1 | DUF1738 domain-containing protein | - |
| CMV14_RS17910 () | 3812413..3812865 | + | 453 | WP_066970291.1 | VOC family protein | - |
| CMV14_RS17915 () | 3812865..3813221 | + | 357 | WP_066970295.1 | ArsR family transcriptional regulator | - |
| CMV14_RS17920 () | 3813218..3813745 | + | 528 | WP_096367739.1 | arsenate reductase ArsC | - |
| CMV14_RS17925 () | 3813742..3814806 | + | 1065 | WP_066970392.1 | ACR3 family arsenite efflux transporter | - |
| CMV14_RS17930 () | 3815155..3815442 | + | 288 | WP_096367785.1 | hypothetical protein | - |
| CMV14_RS17935 () | 3815439..3815873 | + | 435 | WP_066962728.1 | DUF2958 domain-containing protein | - |
| CMV14_RS17940 () | 3815985..3817745 | + | 1761 | WP_066962697.1 | ParB/RepB/Spo0J family partition protein | - |
| CMV14_RS17945 () | 3818479..3818778 | + | 300 | WP_066962694.1 | DUF736 domain-containing protein | - |
| CMV14_RS17950 () | 3818944..3819177 | + | 234 | WP_066962692.1 | helix-turn-helix domain-containing protein | - |
| CMV14_RS17955 () | 3819170..3819754 | + | 585 | WP_066962689.1 | S26 family signal peptidase | - |
| CMV14_RS17960 () | 3819742..3820317 | + | 576 | WP_066962686.1 | lytic transglycosylase domain-containing protein | - |
| CMV14_RS17965 () | 3820544..3820894 | + | 351 | WP_176489036.1 | hypothetical protein | - |
| CMV14_RS17970 () | 3821171..3823135 | + | 1965 | WP_066962680.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| CMV14_RS17975 () | 3823235..3823657 | + | 423 | WP_066962725.1 | DNA mismatch endonuclease Vsr | - |
| CMV14_RS17980 () | 3823654..3824841 | + | 1188 | WP_066962676.1 | DNA (cytosine-5-)-methyltransferase | - |
| CMV14_RS17985 () | 3824838..3825608 | + | 771 | WP_066962673.1 | GIY-YIG nuclease family protein | - |
| CMV14_RS17990 () | 3825662..3826462 | + | 801 | WP_066962670.1 | hypothetical protein | - |
| CMV14_RS17995 () | 3826455..3829775 | + | 3321 | WP_066962667.1 | DEAD/DEAH box helicase | - |
| CMV14_RS18000 () | 3829833..3831062 | - | 1230 | WP_066962664.1 | three-Cys-motif partner protein TcmP | - |
| CMV14_RS18005 () | 3831082..3831864 | - | 783 | WP_066962722.1 | DUF5131 family protein | - |
| CMV14_RS18010 () | 3832370..3832762 | + | 393 | WP_176489030.1 | dual specificity protein phosphatase family protein | - |
| CMV14_RS18015 () | 3832919..3833269 | + | 351 | WP_066962661.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CMV14_RS18020 () | 3833266..3834567 | + | 1302 | WP_066962658.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CMV14_RS18025 () | 3834708..3834848 | - | 141 | Protein_3586 | PAS domain-containing protein | - |
| CMV14_RS18030 () | 3835360..3837129 | + | 1770 | WP_066962719.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| CMV14_RS18040 () | 3837510..3838646 | - | 1137 | WP_021246312.1 | DUF3596 domain-containing protein | - |
| CMV14_RS18045 () | 3838607..3838810 | - | 204 | WP_021246311.1 | excisionase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|