MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88159 bp
Accession: NZ_CP023383 Location: 3883623..3971781 Organism: Escherichia coli strain 1223 Replicon: chromosome
Accession: NZ_CP023383 Location: 3883623..3971781 Organism: Escherichia coli strain 1223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ49_RS19960 () | 3878787..3879449 | - | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| CNQ49_RS19965 () | 3879635..3880594 | + | 960 | WP_000765976.1 | sugar phosphate isomerase/epimerase | - |
| CNQ49_RS19970 () | 3880616..3880993 | + | 378 | WP_001389183.1 | RidA family protein | - |
| CNQ49_RS19975 () | 3881008..3882240 | + | 1233 | WP_001389184.1 | MFS transporter | - |
| CNQ49_RS19980 () | 3882469..3883230 | - | 762 | Protein_3651 | transposase | - |
| CNQ49_RS19985 () | 3883261..3883611 | - | 351 | WP_000624710.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CNQ49_RS19990 () | 3883608..3884027 | - | 420 | WP_000422706.1 | IS66 family insertion sequence hypothetical protein | - |
| CNQ49_RS20005 () | 3885771..3886727 | + | 957 | WP_000301136.1 | hypothetical protein | - |
| CNQ49_RS20010 () | 3886708..3887637 | - | 930 | WP_001328257.1 | DNA (cytosine-5-)-methyltransferase | - |
| CNQ49_RS26475 () | 3887892..3887994 | - | 103 | Protein_3657 | integrase | - |
| CNQ49_RS26245 () | 3888077..3888175 | + | 99 | WP_000745631.1 | transposase | - |
| CNQ49_RS20020 () | 3888155..3888451 | + | 297 | Protein_3659 | transposase | - |
| CNQ49_RS20025 () | 3888598..3889788 | - | 1191 | Protein_3660 | IS3 family transposase | - |
| CNQ49_RS20030 () | 3890003..3891550 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| CNQ49_RS20035 () | 3891550..3896508 | - | 4959 | WP_000877066.1 | NERD domain-containing protein | - |
| CNQ49_RS20040 () | 3896716..3896871 | + | 156 | Protein_3663 | integrase | - |
| CNQ49_RS20045 () | 3896908..3897580 | - | 673 | Protein_3664 | DDE-type integrase/transposase/recombinase | - |
| CNQ49_RS20050 () | 3897710..3898039 | + | 330 | WP_000042910.1 | IS66 family insertion sequence hypothetical protein | - |
| CNQ49_RS20055 () | 3898026..3898418 | + | 393 | WP_000950652.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CNQ49_RS20060 () | 3898425..3899299 | + | 875 | Protein_3667 | transposase | - |
| CNQ49_RS20065 () | 3899259..3900104 | - | 846 | WP_000439135.1 | type VI secretion system baseplate subunit TssG | - |
| CNQ49_RS20070 () | 3900068..3901747 | - | 1680 | Protein_3669 | type VI secretion system baseplate subunit TssF | - |
| CNQ49_RS20075 () | 3901725..3901910 | - | 186 | WP_001389193.1 | hypothetical protein | - |
| CNQ49_RS20080 () | 3901999..3902499 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| CNQ49_RS20090 () | 3902767..3902997 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| CNQ49_RS20095 () | 3903066..3903626 | - | 561 | WP_000991581.1 | hypothetical protein | - |
| CNQ49_RS20100 () | 3903884..3904450 | - | 567 | WP_001126801.1 | inovirus-type Gp2 protein | - |
| CNQ49_RS20105 () | 3906028..3906732 | + | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CNQ49_RS20115 () | 3907156..3907887 | - | 732 | WP_023181005.1 | inovirus Gp2 family protein | - |
| CNQ49_RS20125 () | 3909412..3910542 | - | 1131 | WP_000147745.1 | hypothetical protein | - |
| CNQ49_RS20130 () | 3910727..3911611 | + | 885 | WP_029364114.1 | 50S ribosome-binding GTPase | - |
| CNQ49_RS20135 () | 3911813..3912493 | + | 681 | Protein_3679 | WYL domain-containing protein | - |
| CNQ49_RS20145 () | 3912536..3913837 | + | 1302 | WP_023181003.1 | hypothetical protein | - |
| CNQ49_RS20150 () | 3913900..3914436 | + | 537 | WP_001000101.1 | DUF4234 domain-containing protein | - |
| CNQ49_RS20155 () | 3914512..3914733 | + | 222 | WP_024144968.1 | DUF905 family protein | - |
| CNQ49_RS20165 () | 3914824..3915642 | + | 819 | WP_023181002.1 | DUF945 domain-containing protein | - |
| CNQ49_RS20170 () | 3915734..3916219 | + | 486 | WP_023181001.1 | antirestriction protein | - |
| CNQ49_RS20180 () | 3916235..3916711 | + | 477 | WP_001424026.1 | RadC family protein | - |
| CNQ49_RS20185 () | 3916780..3917001 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| CNQ49_RS20190 () | 3917020..3917664 | + | 645 | WP_024144967.1 | hypothetical protein | - |
| CNQ49_RS20195 () | 3917714..3918082 | + | 369 | WP_023181000.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CNQ49_RS20200 () | 3918172..3918549 | + | 378 | WP_023180999.1 | TA system toxin CbtA family protein | Toxin Detail |
| CNQ49_RS20205 () | 3918546..3919034 | + | 489 | WP_000761678.1 | hypothetical protein | - |
| CNQ49_RS20210 () | 3919046..3919243 | + | 198 | WP_000839240.1 | DUF957 domain-containing protein | - |
| CNQ49_RS20215 () | 3919328..3920194 | + | 867 | WP_021547704.1 | DUF4942 domain-containing protein | - |
| CNQ49_RS20220 () | 3920266..3920529 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CNQ49_RS20225 () | 3920526..3920852 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CNQ49_RS20230 () | 3921316..3922578 | + | 1263 | WP_032161224.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CNQ49_RS20235 () | 3922807..3923504 | - | 698 | Protein_3696 | IS1 family transposase | - |
| CNQ49_RS20245 () | 3923625..3924431 | + | 807 | WP_063097600.1 | HNH endonuclease | - |
| CNQ49_RS20250 () | 3924656..3924898 | + | 243 | Protein_3698 | N-acetylneuraminic acid mutarotase | - |
| CNQ49_RS20255 () | 3924986..3925966 | + | 981 | WP_000019446.1 | IS5-like element ISKpn26 family transposase | - |
| CNQ49_RS20265 () | 3926192..3926389 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| CNQ49_RS20275 () | 3926541..3927238 | + | 698 | Protein_3701 | IS1 family transposase | - |
| CNQ49_RS20280 () | 3927359..3929218 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CNQ49_RS20285 () | 3929423..3930289 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| CNQ49_RS20290 () | 3930412..3930660 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| CNQ49_RS20295 () | 3930673..3931014 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CNQ49_RS20300 () | 3931007..3931495 | - | 489 | WP_032161227.1 | hydrogenase-2 assembly chaperone | - |
| CNQ49_RS20305 () | 3931488..3931982 | - | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| CNQ49_RS20310 () | 3931982..3933685 | - | 1704 | WP_000083057.1 | hydrogenase 2 large subunit | - |
| CNQ49_RS20315 () | 3933682..3934860 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| CNQ49_RS20320 () | 3934850..3935836 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| CNQ49_RS20325 () | 3935839..3936957 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| CNQ49_RS20335 () | 3937146..3937433 | - | 288 | WP_001059139.1 | DUF2623 domain-containing protein | - |
| CNQ49_RS20340 () | 3937552..3938439 | - | 888 | WP_001424373.1 | dienelactone hydrolase family protein | - |
| CNQ49_RS20345 () | 3938596..3939636 | + | 1041 | WP_000262171.1 | L-glyceraldehyde 3-phosphate reductase | - |
| CNQ49_RS20350 () | 3939676..3940170 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| CNQ49_RS20355 () | 3940361..3941245 | + | 885 | WP_000018758.1 | NADP(+)-dependent aldehyde reductase | - |
| CNQ49_RS20360 () | 3941517..3941942 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| CNQ49_RS20365 () | 3941949..3942683 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| CNQ49_RS20375 () | 3942935..3944122 | + | 1188 | WP_001320425.1 | cystathionine beta-lyase | - |
| CNQ49_RS20380 () | 3944262..3944921 | + | 660 | WP_000268419.1 | DedA family protein | - |
| CNQ49_RS20385 () | 3944961..3945860 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| CNQ49_RS20390 () | 3946054..3947217 | + | 1164 | WP_023281484.1 | alcohol dehydrogenase | - |
| CNQ49_RS20395 () | 3947322..3948149 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| CNQ49_RS20400 () | 3948349..3949274 | + | 926 | Protein_3724 | YbjP/YqhG family protein | - |
| CNQ49_RS20405 () | 3949325..3949582 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| CNQ49_RS20410 () | 3949625..3951844 | - | 2220 | WP_000095154.1 | YgiQ family radical SAM protein | - |
| CNQ49_RS20415 () | 3951955..3953367 | - | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| CNQ49_RS20420 () | 3953442..3954179 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| CNQ49_RS20425 () | 3954413..3956671 | - | 2259 | WP_049253102.1 | DNA topoisomerase IV subunit A | - |
| CNQ49_RS20430 () | 3956809..3958416 | - | 1608 | WP_001295629.1 | ABC transporter substrate-binding protein | - |
| CNQ49_RS20435 () | 3958549..3958944 | - | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| CNQ49_RS20440 () | 3958946..3959242 | - | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| CNQ49_RS20445 () | 3959447..3959929 | - | 483 | WP_000183505.1 | transcriptional regulator | - |
| CNQ49_RS20450 () | 3959982..3960374 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| CNQ49_RS20455 () | 3960526..3961185 | + | 660 | WP_001221493.1 | two-component system response regulator QseB | - |
| CNQ49_RS20460 () | 3961182..3962531 | + | 1350 | WP_001618857.1 | two-component system sensor histidine kinase QseC | - |
| CNQ49_RS20465 () | 3962577..3962909 | - | 333 | WP_000917684.1 | DUF2645 family protein | - |
| CNQ49_RS20475 () | 3963228..3963809 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| CNQ49_RS20480 () | 3963840..3964154 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| CNQ49_RS20485 () | 3964202..3966094 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| CNQ49_RS20490 () | 3966123..3966704 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| CNQ49_RS20495 () | 3966704..3967531 | - | 828 | WP_000444752.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| CNQ49_RS20500 () | 3967556..3967978 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| CNQ49_RS20505 () | 3967979..3968608 | - | 630 | WP_000917138.1 | ADP-ribose diphosphatase | - |
| CNQ49_RS20510 () | 3968813..3970294 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| CNQ49_RS20520 () | 3970442..3971113 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| CNQ49_RS20525 () | 3971119..3972279 | + | 1161 | WP_049253110.1 | glutathionylspermidine synthase family protein | - |
| CNQ49_RS20530 () | 3972317..3973105 | - | 789 | WP_024238463.1 | 4,5-DOPA dioxygenase extradiol | - |
| CNQ49_RS20535 () | 3973248..3974021 | + | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| CNQ49_RS20540 () | 3974079..3974249 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| CNQ49_RS20545 () | 3974511..3975164 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| CNQ49_RS20550 () | 3975538..3975828 | + | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| CNQ49_RS20555 () | 3976112..3976663 | + | 552 | WP_001272145.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|