MGE detailed information
MGE type: Conjugative plasmid MGE length: 66332 bp
Accession: NZ_CP023369 Location: 1..66332 Organism: Escherichia coli strain 1428 Replicon: plasmid p66
Accession: NZ_CP023369 Location: 1..66332 Organism: Escherichia coli strain 1428 Replicon: plasmid p66
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ52_RS26405 () | 13..870 | + | 858 | WP_000130995.1 | incFII family plasmid replication initiator RepA | - |
| CNQ52_RS27935 () | 1573..1713 | + | 141 | WP_000829596.1 | hypothetical protein | - |
| CNQ52_RS26420 () | 1786..2055 | + | 270 | WP_000079945.1 | hypothetical protein | Antitoxin Detail |
| CNQ52_RS26425 () | 2052..2333 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ52_RS28060 () | 2405..2583 | + | 179 | Protein_5 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CNQ52_RS26435 () | 2654..3535 | + | 882 | WP_000005460.1 | hypothetical protein | - |
| CNQ52_RS26440 () | 3470..3889 | - | 420 | WP_024181414.1 | hypothetical protein | - |
| CNQ52_RS26445 () | 3998..4348 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| CNQ52_RS26450 () | 4351..5313 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| CNQ52_RS26460 () | 5848..6750 | + | 903 | WP_001513647.1 | DUF1281 domain-containing protein | - |
| CNQ52_RS26465 () | 6747..7058 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| CNQ52_RS26470 () | 7135..7819 | + | 685 | Protein_12 | DNA methylase | - |
| CNQ52_RS26475 () | 7820..8041 | + | 222 | WP_001104865.1 | hypothetical protein | - |
| CNQ52_RS26480 () | 8055..8489 | + | 435 | WP_000274447.1 | DUF1380 family protein | - |
| CNQ52_RS26485 () | 8539..9293 | + | 755 | Protein_15 | hypothetical protein | - |
| CNQ52_RS28065 () | 9872..10175 | + | 304 | Protein_16 | antirestriction protein | - |
| CNQ52_RS26500 () | 10229..10425 | + | 197 | Protein_17 | DNA methylase | - |
| CNQ52_RS26505 () | 10486..10693 | + | 208 | Protein_18 | DNA methylase | - |
| CNQ52_RS26510 () | 10656..10847 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CNQ52_RS26515 () | 11167..11760 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CNQ52_RS26520 () | 11873..13078 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| CNQ52_RS26525 () | 13160..13783 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CNQ52_RS26530 () | 13773..13997 | + | 225 | WP_021503354.1 | hypothetical protein | - |
| CNQ52_RS26545 () | 14661..14891 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CNQ52_RS26550 () | 14943..16304 | + | 1362 | WP_000170673.1 | DUF3560 domain-containing protein | - |
| CNQ52_RS26555 () | 16351..16914 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| CNQ52_RS27940 () | 17066..17350 | + | 285 | WP_072165043.1 | hypothetical protein | - |
| CNQ52_RS28070 () | 17254..17478 | - | 225 | WP_001380475.1 | hypothetical protein | - |
| CNQ52_RS26575 () | 17823..18350 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| CNQ52_RS26580 () | 18406..18639 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| CNQ52_RS26585 () | 18698..20656 | + | 1959 | WP_096040789.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ52_RS26590 () | 20711..21145 | + | 435 | WP_000845966.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ52_RS26595 () | 21142..21861 | + | 720 | WP_000994097.1 | plasmid SOS inhibition protein A | - |
| CNQ52_RS26600 () | 21858..22172 | + | 315 | WP_000870669.1 | hypothetical protein | - |
| - () | 22129..22328 | + | 200 | NuclAT_0 | - | - |
| - () | 22129..22328 | + | 200 | NuclAT_0 | - | - |
| - () | 22129..22328 | + | 200 | NuclAT_0 | - | - |
| - () | 22129..22328 | + | 200 | NuclAT_0 | - | - |
| CNQ52_RS26610 () | 22381..22542 | + | 162 | WP_000775237.1 | type I toxin-antitoxin system Hok family toxin | - |
| CNQ52_RS28075 () | 22843..23092 | - | 250 | Protein_36 | hypothetical protein | - |
| CNQ52_RS26630 () | 23388..23711 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| CNQ52_RS26635 () | 23770..24012 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| CNQ52_RS26645 () | 24279..24527 | + | 249 | WP_096040790.1 | hypothetical protein | - |
| CNQ52_RS26670 () | 24998..25294 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CNQ52_RS26675 () | 25403..26224 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| CNQ52_RS26680 () | 26519..27166 | - | 648 | WP_143361368.1 | hypothetical protein | VF |
| CNQ52_RS26685 () | 27443..27826 | + | 384 | WP_000124979.1 | relaxosome protein TraM | - |
| CNQ52_RS26690 () | 28017..28703 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| CNQ52_RS26695 () | 28798..29025 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| CNQ52_RS26700 () | 29059..29422 | + | 364 | Protein_46 | type IV conjugative transfer system pilin TraA | - |
| CNQ52_RS26705 () | 29427..29738 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CNQ52_RS26710 () | 29760..30326 | + | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| CNQ52_RS26715 () | 30337..31041 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CNQ52_RS26725 () | 31041..32475 | + | 1435 | Protein_50 | conjugal transfer protein TraB | - |
| CNQ52_RS26730 () | 32465..33057 | + | 593 | Protein_51 | conjugal transfer protein TraP | - |
| CNQ52_RS26735 () | 33011..33329 | + | 319 | Protein_52 | conjugal transfer protein TrbD | - |
| CNQ52_RS26740 () | 33378..33893 | + | 516 | WP_039520293.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CNQ52_RS26745 () | 34028..34249 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| CNQ52_RS26750 () | 34242..34646 | + | 405 | WP_042110595.1 | hypothetical protein | - |
| CNQ52_RS26755 () | 34639..35112 | + | 474 | WP_000549595.1 | hypothetical protein | - |
| CNQ52_RS26760 () | 35192..35407 | + | 216 | WP_042110597.1 | hypothetical protein | - |
| CNQ52_RS27945 () | 35435..35797 | + | 363 | WP_039520300.1 | hypothetical protein | - |
| CNQ52_RS26770 () | 35926..38557 | + | 2632 | Protein_59 | type IV secretion system protein TraC | - |
| CNQ52_RS26775 () | 38554..38940 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| CNQ52_RS26780 () | 38937..39571 | + | 635 | Protein_61 | type-F conjugative transfer system protein TraW | - |
| CNQ52_RS28080 () | 39568..40563 | + | 996 | Protein_62 | conjugal transfer pilus assembly protein TraU | - |
| CNQ52_RS26800 () | 40589..41050 | + | 462 | WP_096040793.1 | hypothetical protein | - |
| CNQ52_RS26805 () | 41295..41747 | + | 453 | WP_096040780.1 | hypothetical protein | - |
| CNQ52_RS26810 () | 41775..42413 | + | 639 | WP_071686309.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CNQ52_RS26815 () | 42410..42869 | + | 460 | Protein_66 | conjugal transfer protein TraN | - |
| CNQ52_RS26820 () | 42897..44221 | + | 1325 | Protein_67 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CNQ52_RS26825 () | 44248..44505 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CNQ52_RS26830 () | 44498..45241 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CNQ52_RS26835 () | 45257..45604 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| CNQ52_RS26840 () | 45723..46007 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CNQ52_RS26845 () | 45994..46538 | + | 545 | Protein_72 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CNQ52_RS26850 () | 46468..46808 | + | 341 | Protein_73 | P-type conjugative transfer protein TrbJ | - |
| CNQ52_RS26855 () | 46762..47175 | + | 414 | WP_071600849.1 | F-type conjugal transfer protein TrbF | - |
| CNQ52_RS26860 () | 47175..48550 | + | 1376 | Protein_75 | conjugal transfer protein TraH | - |
| CNQ52_RS26865 () | 48547..51370 | + | 2824 | Protein_76 | conjugal transfer mating pair stabilization protein TraG | - |
| CNQ52_RS26870 () | 51386..51883 | + | 498 | WP_032160253.1 | entry exclusion protein | - |
| CNQ52_RS26875 () | 51915..52646 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CNQ52_RS26880 () | 52899..55107 | + | 2209 | Protein_79 | type IV conjugative transfer system coupling protein TraD | - |
| CNQ52_RS28085 () | 55107..60121 | + | 5015 | Protein_80 | conjugative transfer relaxase/helicase TraI | - |
| CNQ52_RS26895 () | 60478..61173 | + | 696 | Protein_81 | conjugal transfer pilus acetylase TraX | - |
| CNQ52_RS26900 () | 61228..61789 | + | 562 | Protein_82 | fertility inhibition protein FinO | - |
| CNQ52_RS26905 () | 61921..62133 | + | 213 | WP_033803062.1 | ANR family transcriptional regulator | - |
| CNQ52_RS26910 () | 62420..63097 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| CNQ52_RS26915 () | 63763..63954 | + | 192 | WP_071528006.1 | hypothetical protein | - |
| CNQ52_RS26920 () | 64198..64659 | + | 462 | WP_000978821.1 | thermonuclease family protein | - |
| CNQ52_RS26925 () | 64705..64914 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CNQ52_RS26930 () | 64952..65542 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| CNQ52_RS26935 () | 65768..66031 | + | 264 | WP_198321365.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|