MGE detailed information
MGE type: Prophage MGE length: 46612 bp
Accession: NZ_CP023366 Location: 4553967..4600578 Organism: Escherichia coli strain 1428 Replicon: chromosome
Accession: NZ_CP023366 Location: 4553967..4600578 Organism: Escherichia coli strain 1428 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ52_RS23065 () | 4549022..4549438 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| CNQ52_RS23070 () | 4549549..4550262 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| CNQ52_RS23075 () | 4550663..4551166 | + | 504 | WP_001027697.1 | hypothetical protein | - |
| CNQ52_RS23080 () | 4551389..4552582 | - | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| CNQ52_RS23085 () | 4552835..4553914 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| CNQ52_RS23090 () | 4553967..4555382 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| CNQ52_RS23095 () | 4555465..4556448 | + | 984 | WP_000235517.1 | Quinone oxidoreductase 1 | VF |
| CNQ52_RS23100 () | 4556614..4556856 | - | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| CNQ52_RS23105 () | 4556990..4558027 | - | 1038 | WP_001528313.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| CNQ52_RS23110 () | 4558116..4559213 | + | 1098 | WP_021567874.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CNQ52_RS23115 () | 4559274..4559522 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| CNQ52_RS23120 () | 4559626..4559781 | - | 156 | Protein_4257 | helix-turn-helix domain-containing protein | - |
| CNQ52_RS23125 () | 4559883..4561811 | - | 1929 | WP_021567873.1 | hypothetical protein | - |
| CNQ52_RS23130 () | 4561815..4562399 | - | 585 | WP_021567872.1 | YmfQ family protein | - |
| CNQ52_RS23135 () | 4562390..4563448 | - | 1059 | WP_048230182.1 | baseplate J/gp47 family protein | - |
| CNQ52_RS23140 () | 4563435..4563860 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| CNQ52_RS23145 () | 4563860..4564408 | - | 549 | WP_001752126.1 | phage baseplate assembly protein V | - |
| CNQ52_RS23150 () | 4564408..4565487 | - | 1080 | WP_021567870.1 | phage tail protein | - |
| CNQ52_RS23155 () | 4565484..4566812 | - | 1329 | WP_000219915.1 | DNA circularization N-terminal domain-containing protein | - |
| CNQ52_RS23160 () | 4566903..4567415 | - | 513 | WP_001439754.1 | hypothetical protein | - |
| CNQ52_RS23165 () | 4567497..4569329 | - | 1833 | WP_021567868.1 | phage tail tape measure protein | - |
| CNQ52_RS23175 () | 4569471..4569740 | - | 270 | WP_021567867.1 | phage tail assembly protein | - |
| CNQ52_RS23180 () | 4569740..4570096 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| CNQ52_RS23185 () | 4570096..4571592 | - | 1497 | WP_021567866.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CNQ52_RS23190 () | 4571576..4571746 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| CNQ52_RS23195 () | 4571755..4572315 | - | 561 | WP_021567865.1 | hypothetical protein | - |
| CNQ52_RS23200 () | 4572312..4572818 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| CNQ52_RS23205 () | 4572793..4573203 | - | 411 | WP_021567864.1 | phage head closure protein | - |
| CNQ52_RS23210 () | 4573200..4573523 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| CNQ52_RS23215 () | 4573526..4573726 | - | 201 | WP_096040752.1 | hypothetical protein | - |
| CNQ52_RS23220 () | 4573775..4574980 | - | 1206 | WP_000257490.1 | phage major capsid protein | - |
| CNQ52_RS23225 () | 4574995..4575645 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| CNQ52_RS23230 () | 4575623..4576864 | - | 1242 | WP_021513315.1 | phage portal protein | - |
| CNQ52_RS23235 () | 4576864..4577046 | - | 183 | WP_000605606.1 | hypothetical protein | - |
| CNQ52_RS23240 () | 4577058..4578554 | - | 1497 | WP_072011717.1 | terminase large subunit | - |
| CNQ52_RS23245 () | 4578788..4579282 | - | 495 | WP_123059992.1 | phage terminase small subunit P27 family | - |
| CNQ52_RS23250 () | 4579408..4579758 | - | 351 | WP_001764251.1 | HNH endonuclease | - |
| CNQ52_RS23255 () | 4579925..4580149 | - | 225 | WP_000892817.1 | hypothetical protein | - |
| CNQ52_RS23265 () | 4580417..4580878 | - | 462 | WP_001701537.1 | lysis protein | - |
| CNQ52_RS23270 () | 4580862..4581338 | - | 477 | WP_001197758.1 | glycoside hydrolase family protein | - |
| CNQ52_RS23275 () | 4581342..4581668 | - | 327 | WP_001120490.1 | phage holin, lambda family | - |
| CNQ52_RS23280 () | 4581745..4582797 | - | 1053 | WP_096040754.1 | site-specific DNA-methyltransferase | - |
| CNQ52_RS23285 () | 4582948..4583151 | - | 204 | WP_000917730.1 | hypothetical protein | - |
| CNQ52_RS23290 () | 4583552..4584415 | + | 864 | WP_000750482.1 | NYN domain-containing protein | - |
| CNQ52_RS23295 () | 4584428..4584793 | - | 366 | WP_077908626.1 | antitermination protein Q | - |
| CNQ52_RS23300 () | 4584809..4585798 | - | 990 | WP_096040755.1 | DUF968 domain-containing protein | - |
| CNQ52_RS23305 () | 4585806..4586603 | - | 798 | WP_032192240.1 | KilA-N domain-containing protein | - |
| CNQ52_RS23310 () | 4586623..4587012 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CNQ52_RS23315 () | 4587009..4587335 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| CNQ52_RS23320 () | 4587335..4587829 | - | 495 | WP_001407082.1 | PerC family transcriptional regulator | - |
| CNQ52_RS23325 () | 4587826..4588767 | - | 942 | WP_000104967.1 | helix-turn-helix domain-containing protein | - |
| CNQ52_RS23330 () | 4588757..4588936 | - | 180 | WP_096040756.1 | DUF4222 domain-containing protein | - |
| CNQ52_RS23335 () | 4589112..4589663 | - | 552 | WP_000515830.1 | protein YmfL | - |
| CNQ52_RS23340 () | 4589707..4589907 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| CNQ52_RS23345 () | 4589998..4590672 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| CNQ52_RS23350 () | 4590907..4591113 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| CNQ52_RS23355 () | 4591085..4591519 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| CNQ52_RS27890 () | 4591663..4591973 | + | 311 | Protein_4303 | hypothetical protein | - |
| CNQ52_RS23370 () | 4591988..4592350 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| CNQ52_RS23375 () | 4592416..4593240 | + | 825 | WP_023307624.1 | DUF2303 family protein | - |
| CNQ52_RS23380 () | 4593459..4594211 | + | 753 | WP_029396186.1 | hypothetical protein | - |
| CNQ52_RS23385 () | 4594248..4594520 | + | 273 | WP_022630955.1 | pyocin activator PrtN family protein | - |
| CNQ52_RS23390 () | 4594554..4595102 | - | 549 | WP_021563277.1 | hypothetical protein | Toxin Detail |
| CNQ52_RS23395 () | 4595124..4595597 | - | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| CNQ52_RS23400 () | 4595884..4596006 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| CNQ52_RS23405 () | 4596506..4597372 | - | 867 | WP_157732838.1 | DUF2713 family protein | - |
| CNQ52_RS23410 () | 4597690..4598205 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| CNQ52_RS23415 () | 4598247..4598456 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| CNQ52_RS23420 () | 4598572..4599897 | - | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| CNQ52_RS23425 () | 4599970..4600578 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| CNQ52_RS23430 () | 4600688..4601056 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| CNQ52_RS23435 () | 4601227..4603650 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| CNQ52_RS23440 () | 4603805..4604677 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| CNQ52_RS23445 () | 4604690..4605187 | - | 498 | WP_001308201.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|