MGE detailed information
MGE type: Conjugative plasmid MGE length: 85570 bp
Accession: NZ_CP023362 Location: 1..85570 Organism: Escherichia coli strain 1943 Replicon: plasmid p85
Accession: NZ_CP023362 Location: 1..85570 Organism: Escherichia coli strain 1943 Replicon: plasmid p85
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ54_RS25235 () | 1..1032 | + | 1032 | WP_023518831.1 | RepZ | - |
| CNQ54_RS26280 () | 1728..1868 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| CNQ54_RS25255 () | 2101..2610 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| CNQ54_RS25260 () | 2666..3268 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| CNQ54_RS25270 () | 3622..4968 | + | 1347 | WP_001703911.1 | hypothetical protein | - |
| CNQ54_RS26285 () | 5499..5801 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CNQ54_RS25280 () | 5798..6424 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CNQ54_RS25285 () | 6604..7875 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| CNQ54_RS25290 () | 7875..8312 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ54_RS25295 () | 8309..8557 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CNQ54_RS25305 () | 8975..9877 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| CNQ54_RS25310 () | 9972..10307 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| CNQ54_RS25315 () | 10645..11625 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| CNQ54_RS25320 () | 11628..12050 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| CNQ54_RS25325 () | 12054..12365 | + | 312 | WP_096035146.1 | hypothetical protein | - |
| CNQ54_RS25330 () | 12441..13124 | + | 684 | WP_000086127.1 | DNA methylase | - |
| CNQ54_RS25335 () | 13125..13346 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| CNQ54_RS25340 () | 13360..13794 | + | 435 | WP_011264065.1 | DUF1380 family protein | - |
| CNQ54_RS26125 () | 13839..14609 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| CNQ54_RS25355 () | 15150..15452 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CNQ54_RS25360 () | 15499..15921 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| CNQ54_RS25365 () | 15918..16109 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CNQ54_RS26130 () | 16180..16494 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| CNQ54_RS25380 () | 16878..17405 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CNQ54_RS25385 () | 17463..17696 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CNQ54_RS25390 () | 17755..19713 | + | 1959 | WP_011264061.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ54_RS25395 () | 19766..20200 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ54_RS25400 () | 20197..20916 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| CNQ54_RS25405 () | 20913..21509 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| CNQ54_RS25415 () | 21971..22471 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| CNQ54_RS25430 () | 23200..23634 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| CNQ54_RS25435 () | 23728..23994 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| CNQ54_RS25440 () | 24171..24560 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| CNQ54_RS25445 () | 24557..25459 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ54_RS25450 () | 25521..25727 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| CNQ54_RS25455 () | 25758..26009 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CNQ54_RS26290 () | 26043..26240 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| CNQ54_RS25470 () | 26589..27437 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| CNQ54_RS25475 () | 27524..27859 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| CNQ54_RS25480 () | 28093..28425 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CNQ54_RS25485 () | 28436..31135 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| CNQ54_RS25490 () | 31173..33464 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| CNQ54_RS25495 () | 33457..34527 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| CNQ54_RS25500 () | 34546..35754 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 35934..35991 | - | 58 | NuclAT_1 | - | - |
| - () | 35934..35991 | - | 58 | NuclAT_1 | - | - |
| - () | 35934..35991 | - | 58 | NuclAT_1 | - | - |
| - () | 35934..35991 | - | 58 | NuclAT_1 | - | - |
| CNQ54_RS25505 () | 36061..36810 | - | 750 | Protein_44 | protein finQ | - |
| CNQ54_RS25510 () | 37039..37356 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CNQ54_RS25515 () | 37353..37886 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| CNQ54_RS25520 () | 37980..39125 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| - () | 39474..39534 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39474..39534 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39474..39534 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39474..39534 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| CNQ54_RS25525 () | 39586..39738 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| CNQ54_RS25530 () | 39810..40061 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CNQ54_RS25535 () | 40361..40657 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| CNQ54_RS26295 () | 40722..40898 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| CNQ54_RS25540 () | 41290..41499 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CNQ54_RS25545 () | 41571..42233 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ54_RS25550 () | 42304..44472 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| CNQ54_RS25555 () | 44569..45153 | - | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| CNQ54_RS25560 () | 45182..46384 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| CNQ54_RS25565 () | 46351..46965 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CNQ54_RS25570 () | 46965..50009 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| CNQ54_RS25575 () | 50099..50899 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CNQ54_RS25580 () | 50883..51071 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CNQ54_RS25585 () | 51135..51539 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| CNQ54_RS25590 () | 51590..52117 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CNQ54_RS25595 () | 52117..52821 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| CNQ54_RS25600 () | 52821..54110 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| CNQ54_RS25605 () | 54113..55096 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| CNQ54_RS25610 () | 55107..55799 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ54_RS25615 () | 55796..56143 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CNQ54_RS25620 () | 56161..59928 | - | 3768 | WP_023518849.1 | SogL | - |
| CNQ54_RS25625 () | 60018..60569 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| CNQ54_RS25630 () | 60584..60874 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CNQ54_RS25635 () | 60871..62019 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CNQ54_RS25640 () | 62016..62834 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CNQ54_RS25645 () | 62831..63289 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CNQ54_RS25650 () | 63684..64268 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CNQ54_RS25655 () | 64328..65530 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| CNQ54_RS25660 () | 65616..66440 | - | 825 | WP_023518851.1 | hypothetical protein | - |
| CNQ54_RS25665 () | 66591..67745 | - | 1155 | WP_001139955.1 | integrase | - |
| CNQ54_RS25695 () | 69449..70552 | - | 1104 | Protein_78 | hypothetical protein | VF |
| CNQ54_RS25700 () | 70540..71196 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| CNQ54_RS25705 () | 71181..71741 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| CNQ54_RS25710 () | 71751..72365 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| CNQ54_RS25715 () | 72382..73467 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CNQ54_RS25720 () | 73480..75033 | - | 1554 | WP_023518854.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ54_RS25725 () | 75044..75496 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| CNQ54_RS25730 () | 75483..76778 | - | 1296 | WP_023518855.1 | type 4b pilus protein PilO2 | - |
| CNQ54_RS25735 () | 76771..78453 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ54_RS25740 () | 78467..78904 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| CNQ54_RS25745 () | 78904..79970 | - | 1067 | Protein_88 | hypothetical protein | VF |
| CNQ54_RS25765 () | 81017..81271 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CNQ54_RS25770 () | 81443..82126 | - | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| CNQ54_RS25785 () | 82656..83353 | - | 698 | Protein_91 | IS1 family transposase IS1X2 | Transposase |
| CNQ54_RS25795 () | 83408..83689 | - | 282 | Protein_92 | transcription termination factor NusG | - |
| CNQ54_RS25805 () | 84131..84418 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| CNQ54_RS25810 () | 84336..84599 | - | 264 | WP_032180564.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|