MGE detailed information
MGE type: Conjugative plasmid MGE length: 100008 bp
Accession: NZ_CP023358 Location: 1..100008 Organism: Escherichia coli strain 317 Replicon: plasmid p100
Accession: NZ_CP023358 Location: 1..100008 Organism: Escherichia coli strain 317 Replicon: plasmid p100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ55_RS25625 () | 1502..2134 | + | 633 | WP_000312330.1 | ParA family protein | - |
| CNQ55_RS26735 () | 2134..2508 | + | 375 | WP_042021187.1 | hypothetical protein | - |
| CNQ55_RS25635 () | 2747..3721 | + | 975 | WP_042021185.1 | StbA family protein | - |
| CNQ55_RS25640 () | 3725..4117 | + | 393 | WP_000272016.1 | plasmid partitioning/stability family protein | - |
| CNQ55_RS25645 () | 4258..4380 | - | 123 | Protein_5 | DinI family protein | - |
| CNQ55_RS25655 () | 4798..5547 | + | 750 | Protein_6 | DUF1281 domain-containing protein | - |
| CNQ55_RS26740 () | 5507..5947 | - | 441 | WP_182528595.1 | hypothetical protein | - |
| CNQ55_RS25670 () | 6460..6690 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| CNQ55_RS25675 () | 6742..8103 | + | 1362 | WP_096037667.1 | DUF3560 domain-containing protein | - |
| CNQ55_RS25680 () | 8149..8712 | + | 564 | WP_096037668.1 | class I SAM-dependent methyltransferase | - |
| CNQ55_RS25685 () | 8797..9223 | - | 427 | Protein_11 | hypothetical protein | - |
| CNQ55_RS25695 () | 9522..10055 | + | 534 | WP_096037670.1 | single-stranded DNA-binding protein | - |
| CNQ55_RS25700 () | 10113..10346 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| CNQ55_RS25705 () | 10410..12368 | + | 1959 | WP_096037671.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ55_RS25710 () | 12423..12857 | + | 435 | WP_000845914.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ55_RS25715 () | 12854..13573 | + | 720 | WP_042021717.1 | plasmid SOS inhibition protein A | - |
| - () | 13587..13802 | + | 216 | NuclAT_0 | - | - |
| - () | 13587..13802 | + | 216 | NuclAT_0 | - | - |
| - () | 13587..13802 | + | 216 | NuclAT_0 | - | - |
| - () | 13587..13802 | + | 216 | NuclAT_0 | - | - |
| CNQ55_RS25720 () | 13848..14009 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| CNQ55_RS26745 () | 14247..14612 | - | 366 | WP_182528594.1 | hypothetical protein | - |
| CNQ55_RS25740 () | 14913..15200 | + | 288 | WP_069934604.1 | hypothetical protein | - |
| CNQ55_RS25745 () | 15319..16140 | + | 822 | WP_042021726.1 | DUF945 domain-containing protein | - |
| CNQ55_RS25750 () | 16437..17027 | - | 591 | WP_168926342.1 | hypothetical protein | VF |
| CNQ55_RS25755 () | 17362..17745 | + | 384 | WP_096037724.1 | relaxosome protein TraM | - |
| CNQ55_RS25760 () | 17940..18632 | + | 693 | WP_096037673.1 | PAS domain-containing protein | - |
| CNQ55_RS25765 () | 18720..18947 | + | 228 | WP_001254389.1 | conjugal transfer relaxosome protein TraY | - |
| CNQ55_RS25770 () | 18981..19346 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| CNQ55_RS25775 () | 19361..19672 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CNQ55_RS25780 () | 19694..20260 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CNQ55_RS25785 () | 20271..20975 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CNQ55_RS25790 () | 20975..22402 | + | 1428 | WP_031570446.1 | conjugal transfer protein TraB | - |
| CNQ55_RS25795 () | 22392..22982 | + | 591 | WP_096037674.1 | conjugal transfer protein TraP | - |
| CNQ55_RS25800 () | 22936..23289 | + | 354 | WP_096037675.1 | conjugal transfer protein TrbD | - |
| CNQ55_RS25805 () | 23286..23801 | + | 516 | WP_096037676.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CNQ55_RS25810 () | 23936..24157 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| CNQ55_RS25815 () | 24150..24563 | + | 414 | WP_039520297.1 | hypothetical protein | - |
| CNQ55_RS25820 () | 24556..25029 | + | 474 | WP_157740249.1 | hypothetical protein | - |
| CNQ55_RS25825 () | 25109..25324 | + | 216 | WP_096037678.1 | hypothetical protein | - |
| CNQ55_RS25830 () | 25325..25636 | + | 312 | WP_096037679.1 | hypothetical protein | - |
| CNQ55_RS26575 () | 25940..26302 | + | 363 | WP_157740251.1 | hypothetical protein | - |
| CNQ55_RS25845 () | 26428..29058 | + | 2631 | WP_096037681.1 | type IV secretion system protein TraC | - |
| CNQ55_RS25850 () | 29055..29441 | + | 387 | WP_096037682.1 | type-F conjugative transfer system protein TrbI | - |
| CNQ55_RS25855 () | 29438..30070 | + | 633 | WP_096037683.1 | type-F conjugative transfer system protein TraW | - |
| CNQ55_RS25860 () | 30067..31059 | + | 993 | WP_096037684.1 | conjugal transfer pilus assembly protein TraU | - |
| CNQ55_RS25870 () | 31462..31980 | + | 519 | WP_096037686.1 | hypothetical protein | - |
| CNQ55_RS25875 () | 32007..32645 | + | 639 | WP_059320931.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CNQ55_RS25880 () | 32642..33013 | + | 372 | WP_096037687.1 | hypothetical protein | - |
| CNQ55_RS25885 () | 33039..33461 | + | 423 | WP_059320930.1 | HNH endonuclease | - |
| CNQ55_RS25890 () | 33458..35308 | + | 1851 | WP_096037688.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CNQ55_RS25895 () | 35335..35592 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| CNQ55_RS25900 () | 35585..36328 | + | 744 | WP_157740253.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CNQ55_RS25905 () | 36467..36706 | + | 240 | WP_096037690.1 | hypothetical protein | - |
| CNQ55_RS25910 () | 36792..37238 | + | 447 | WP_096037691.1 | hypothetical protein | - |
| CNQ55_RS25915 () | 37305..37586 | + | 282 | WP_042021772.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CNQ55_RS25920 () | 37573..38127 | + | 555 | WP_096037692.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CNQ55_RS25925 () | 38084..38419 | + | 336 | WP_077781185.1 | P-type conjugative transfer protein TrbJ | - |
| CNQ55_RS25930 () | 38419..39792 | + | 1374 | WP_143209252.1 | conjugal transfer protein TraH | - |
| CNQ55_RS25935 () | 39789..42626 | + | 2838 | WP_096037694.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CNQ55_RS25940 () | 42659..43162 | + | 504 | WP_096037695.1 | conjugal transfer entry exclusion protein TraS | - |
| CNQ55_RS25945 () | 43202..43933 | + | 732 | WP_157740261.1 | complement resistance protein TraT | - |
| CNQ55_RS25950 () | 44136..44873 | + | 738 | WP_157740255.1 | hypothetical protein | - |
| CNQ55_RS25955 () | 44924..47077 | + | 2154 | WP_096037698.1 | type IV conjugative transfer system coupling protein TraD | - |
| CNQ55_RS25960 () | 47077..52346 | + | 5270 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| CNQ55_RS25965 () | 52366..53112 | + | 747 | WP_096037699.1 | conjugal transfer pilus acetylase TraX | - |
| CNQ55_RS25970 () | 53167..53727 | + | 561 | WP_096037700.1 | fertility inhibition protein FinO | - |
| CNQ55_RS25975 () | 53862..54074 | + | 213 | WP_096037701.1 | hypothetical protein | - |
| CNQ55_RS25985 () | 54453..54855 | + | 403 | Protein_65 | SprT-like domain-containing protein | - |
| CNQ55_RS25990 () | 55092..56594 | + | 1503 | WP_096037702.1 | hypothetical protein | - |
| CNQ55_RS25995 () | 57193..57657 | + | 465 | Protein_67 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| CNQ55_RS26000 () | 57942..58583 | + | 642 | WP_052897785.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CNQ55_RS26750 () | 58629..58724 | + | 96 | Protein_69 | endonuclease | - |
| CNQ55_RS26005 () | 58770..58979 | + | 210 | WP_096037703.1 | hemolysin expression modulator Hha | - |
| CNQ55_RS26010 () | 59018..59608 | + | 591 | WP_096037704.1 | DUF2726 domain-containing protein | - |
| CNQ55_RS26015 () | 59746..60018 | - | 273 | WP_046201741.1 | hypothetical protein | - |
| CNQ55_RS26755 () | 60011..60334 | - | 324 | Protein_73 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| CNQ55_RS26025 () | 60901..61239 | + | 339 | WP_198319678.1 | reverse transcriptase/maturase | - |
| CNQ55_RS26030 () | 61239..62045 | + | 807 | WP_096037706.1 | maturase | - |
| CNQ55_RS26040 () | 62871..63506 | + | 636 | WP_096037707.1 | CPBP family intramembrane metalloprotease | - |
| CNQ55_RS26045 () | 63609..64862 | + | 1254 | WP_096037708.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| CNQ55_RS26050 () | 64862..67051 | + | 2190 | WP_096037709.1 | peptidase domain-containing ABC transporter | - |
| CNQ55_RS26060 () | 67561..68388 | - | 828 | Protein_79 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| CNQ55_RS26065 () | 68391..68891 | + | 501 | Protein_80 | DUF2726 domain-containing protein | - |
| CNQ55_RS26070 () | 69131..69391 | + | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
| CNQ55_RS26080 () | 69627..69701 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CNQ55_RS26085 () | 69694..70551 | + | 858 | WP_157740257.1 | incFII family plasmid replication initiator RepA | - |
| CNQ55_RS26100 () | 71497..71733 | + | 237 | WP_016233136.1 | hypothetical protein | - |
| CNQ55_RS26105 () | 71858..73057 | + | 1200 | WP_096037714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CNQ55_RS26110 () | 73133..73532 | - | 400 | Protein_86 | hypothetical protein | - |
| CNQ55_RS26120 () | 73618..74571 | + | 954 | WP_157740259.1 | IS21 family transposase IS100kyp | Transposase |
| CNQ55_RS26125 () | 74636..75418 | + | 783 | Protein_88 | IS21 family transposase IS100 | Transposase |
| CNQ55_RS26130 () | 75485..75679 | + | 195 | Protein_89 | Tn3 family transposase | - |
| CNQ55_RS26135 () | 75725..76369 | - | 645 | WP_096037715.1 | ParB N-terminal domain-containing protein | - |
| CNQ55_RS26140 () | 76354..77580 | - | 1227 | WP_042020968.1 | phosphoadenosine phosphosulfate reductase | - |
| CNQ55_RS26145 () | 78311..78862 | + | 552 | WP_096037716.1 | hypothetical protein | VF |
| CNQ55_RS26150 () | 78933..79733 | - | 801 | WP_096037717.1 | Outer membrane protein A | VF |
| CNQ55_RS26155 () | 79767..81665 | - | 1899 | WP_096037718.1 | Autotransporter adhesin SadA | VF |
| CNQ55_RS26160 () | 82713..86828 | + | 4116 | WP_096037719.1 | Serine protease pic autotransporter | VF |
| CNQ55_RS26165 () | 87540..87815 | + | 276 | WP_072019639.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CNQ55_RS26170 () | 87844..92163 | + | 4320 | WP_096037720.1 | Autotransporter adhesin SadA | VF |
| CNQ55_RS26175 () | 92187..92960 | + | 774 | WP_042021199.1 | Outer membrane protein A | VF |
| CNQ55_RS26180 () | 93599..94363 | + | 765 | WP_157740265.1 | Adhesin YadA | VF |
| CNQ55_RS26185 () | 94446..94928 | + | 483 | WP_042021198.1 | hypothetical protein | - |
| CNQ55_RS26760 () | 95360..95449 | - | 90 | Protein_101 | IS3 family transposase | - |
| CNQ55_RS26195 () | 96755..97183 | - | 429 | WP_096037721.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CNQ55_RS26200 () | 97180..97410 | - | 231 | WP_042021192.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CNQ55_RS26210 () | 98008..98226 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| CNQ55_RS26215 () | 98228..98533 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | - |
| CNQ55_RS26220 () | 98534..99340 | + | 807 | WP_077781165.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|