MGE detailed information
MGE type: Conjugative plasmid MGE length: 62312 bp
Accession: NZ_CP023354 Location: 1..62312 Organism: Escherichia coli strain 746 Replicon: plasmid p62
Accession: NZ_CP023354 Location: 1..62312 Organism: Escherichia coli strain 746 Replicon: plasmid p62
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ56_RS25850 () | 348..422 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CNQ56_RS25855 () | 415..1272 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| CNQ56_RS25870 () | 2188..2457 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| CNQ56_RS25875 () | 2454..2735 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ56_RS25880 () | 2999..4186 | + | 1188 | WP_000905831.1 | hypothetical protein | - |
| CNQ56_RS25885 () | 4275..5186 | + | 912 | WP_024244186.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CNQ56_RS25890 () | 5328..5723 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| CNQ56_RS25895 () | 5723..6682 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| CNQ56_RS25910 () | 7726..9450 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| CNQ56_RS25920 () | 9527..10429 | + | 903 | WP_064226247.1 | DUF1281 domain-containing protein | - |
| CNQ56_RS25925 () | 10426..10737 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| CNQ56_RS25930 () | 10813..11496 | + | 684 | WP_059328769.1 | DNA methylase | - |
| CNQ56_RS25935 () | 11497..11718 | + | 222 | WP_059328770.1 | hypothetical protein | - |
| CNQ56_RS25940 () | 11730..12164 | + | 435 | WP_059328771.1 | DUF1380 family protein | - |
| CNQ56_RS27855 () | 12210..12990 | + | 781 | Protein_15 | hypothetical protein | - |
| CNQ56_RS25960 () | 13528..13831 | + | 304 | Protein_16 | antirestriction protein | - |
| CNQ56_RS25965 () | 13878..14301 | + | 424 | Protein_17 | DUF1380 family protein | - |
| CNQ56_RS28095 () | 14469..15005 | - | 537 | Protein_18 | hypothetical protein | - |
| CNQ56_RS25980 () | 15522..15752 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CNQ56_RS25985 () | 15804..16974 | + | 1171 | Protein_20 | DUF3560 domain-containing protein | - |
| CNQ56_RS25995 () | 17258..17791 | + | 534 | Protein_21 | class I SAM-dependent methyltransferase | - |
| CNQ56_RS27860 () | 17817..18002 | + | 186 | Protein_22 | hypothetical protein | - |
| CNQ56_RS28100 () | 18142..18411 | - | 270 | WP_198320074.1 | hypothetical protein | - |
| CNQ56_RS28105 () | 18574..18694 | + | 121 | Protein_24 | single-stranded DNA-binding protein | - |
| CNQ56_RS26015 () | 18720..19180 | + | 461 | Protein_25 | single-stranded DNA-binding protein | - |
| CNQ56_RS26020 () | 19312..19546 | + | 235 | Protein_26 | DUF905 family protein | - |
| CNQ56_RS26025 () | 19610..21581 | + | 1972 | Protein_27 | ParB/RepB/Spo0J family partition protein | - |
| CNQ56_RS26030 () | 21636..22069 | + | 434 | Protein_28 | conjugation system SOS inhibitor PsiB | - |
| CNQ56_RS26035 () | 22066..22785 | + | 720 | WP_096035190.1 | plasmid SOS inhibition protein A | - |
| CNQ56_RS26040 () | 22785..23303 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - () | 23279..23427 | + | 149 | NuclAT_0 | - | - |
| - () | 23279..23427 | + | 149 | NuclAT_0 | - | - |
| - () | 23279..23427 | + | 149 | NuclAT_0 | - | - |
| - () | 23279..23427 | + | 149 | NuclAT_0 | - | - |
| CNQ56_RS26050 () | 23479..23637 | + | 159 | WP_024200877.1 | type I toxin-antitoxin system Hok family toxin | - |
| CNQ56_RS26070 () | 24571..24867 | + | 297 | WP_024200873.1 | hypothetical protein | - |
| CNQ56_RS26075 () | 24974..25795 | + | 822 | WP_001234421.1 | DUF945 domain-containing protein | - |
| CNQ56_RS26080 () | 26093..26602 | - | 510 | WP_000759176.1 | transglycosylase SLT domain-containing protein | - |
| CNQ56_RS26085 () | 27016..27399 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| CNQ56_RS26090 () | 27586..28275 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| CNQ56_RS26095 () | 28374..28769 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| CNQ56_RS26100 () | 28802..29161 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| CNQ56_RS26105 () | 29176..29487 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CNQ56_RS26110 () | 29509..30075 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CNQ56_RS26115 () | 30086..30790 | + | 705 | WP_149021906.1 | type-F conjugative transfer system secretin TraK | - |
| CNQ56_RS26120 () | 30790..32217 | + | 1428 | WP_021545202.1 | conjugal transfer protein TraB | - |
| CNQ56_RS26125 () | 32207..32791 | + | 585 | WP_021545201.1 | conjugal transfer protein TraP | - |
| CNQ56_RS26130 () | 32730..33098 | + | 369 | WP_071780811.1 | conjugal transfer protein TrbD | - |
| CNQ56_RS26135 () | 33091..33342 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| CNQ56_RS26140 () | 33339..33854 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CNQ56_RS26145 () | 33989..34210 | + | 222 | WP_072113546.1 | conjugal transfer protein TraR | - |
| CNQ56_RS26150 () | 34603..37233 | + | 2631 | WP_021545198.1 | type IV secretion system protein TraC | - |
| CNQ56_RS26155 () | 37230..37616 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| CNQ56_RS26160 () | 37613..38245 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| CNQ56_RS26165 () | 38242..39234 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CNQ56_RS26170 () | 39260..39721 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| CNQ56_RS26175 () | 39751..40203 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| CNQ56_RS26180 () | 40231..40869 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CNQ56_RS26185 () | 40866..42674 | + | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CNQ56_RS26190 () | 42701..42958 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CNQ56_RS26195 () | 42951..43694 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CNQ56_RS26200 () | 43710..44057 | + | 348 | WP_001287902.1 | conjugal transfer protein TrbA | - |
| CNQ56_RS26205 () | 44176..44460 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CNQ56_RS26210 () | 44447..44992 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CNQ56_RS26215 () | 44922..45284 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| CNQ56_RS26220 () | 45284..46657 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| CNQ56_RS26225 () | 46654..49463 | + | 2810 | Protein_63 | conjugal transfer mating pair stabilization protein TraG | - |
| CNQ56_RS27865 () | 49529..49669 | + | 141 | WP_157739653.1 | hypothetical protein | - |
| CNQ56_RS26230 () | 49617..49841 | + | 225 | WP_157739654.1 | hypothetical protein | - |
| CNQ56_RS26235 () | 49828..49995 | + | 168 | WP_096035192.1 | conjugal transfer protein TraS | - |
| CNQ56_RS27870 () | 50027..50293 | + | 267 | WP_157739655.1 | hypothetical protein | - |
| CNQ56_RS26240 () | 50247..50759 | + | 513 | WP_157739656.1 | hypothetical protein | - |
| CNQ56_RS26245 () | 51012..53247 | + | 2236 | Protein_69 | type IV conjugative transfer system coupling protein TraD | - |
| CNQ56_RS28110 () | 53247..58566 | + | 5320 | Protein_70 | conjugative transfer relaxase/helicase TraI | - |
| CNQ56_RS26275 () | 58651..59360 | + | 710 | Protein_71 | type-F conjugative transfer system pilin acetylase TraX | - |
| CNQ56_RS26280 () | 59418..59975 | + | 558 | Protein_72 | fertility inhibition protein FinO | - |
| CNQ56_RS27880 () | 60153..60353 | - | 201 | WP_157739657.1 | hypothetical protein | - |
| CNQ56_RS26290 () | 60580..61042 | + | 463 | Protein_74 | thermonuclease family protein | - |
| CNQ56_RS26295 () | 61117..61304 | + | 188 | Protein_75 | hemolysin expression modulator Hha | - |
| CNQ56_RS26300 () | 61344..61934 | + | 591 | WP_024228807.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|