MGE detailed information
MGE type: Genomic_island MGE length: 27505 bp
Accession: NZ_CP023272 Location: 4994057..5021561 Organism: Pseudomonas lurida strain MYb11 Replicon: chromosome
Accession: NZ_CP023272 Location: 4994057..5021561 Organism: Pseudomonas lurida strain MYb11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLM75_RS22755 () | 4989215..4991083 | - | 1869 | WP_034109262.1 | protein translocase subunit SecD | - |
| CLM75_RS22760 () | 4991146..4991484 | - | 339 | WP_003175975.1 | preprotein translocase subunit YajC | - |
| CLM75_RS22765 () | 4991528..4992643 | - | 1116 | WP_003175976.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| CLM75_RS22770 () | 4992649..4993698 | - | 1050 | WP_105162817.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| CLM75_RS22780 () | 4994057..4995298 | + | 1242 | WP_105162818.1 | Prophage integrase IntS ; Integrase | Integrase |
| CLM75_RS22785 () | 4995545..4996483 | + | 939 | WP_105162819.1 | hypothetical protein | - |
| CLM75_RS22790 () | 4996566..4996820 | + | 255 | WP_026078127.1 | AlpA family phage regulatory protein | - |
| CLM75_RS22795 () | 4996817..4997122 | + | 306 | WP_105162820.1 | hypothetical protein | - |
| CLM75_RS22800 () | 4997653..4997937 | + | 285 | WP_105162821.1 | hypothetical protein | - |
| CLM75_RS22805 () | 4997934..4998206 | + | 273 | WP_105162822.1 | DUF3077 domain-containing protein | - |
| CLM75_RS22810 () | 4998203..5001091 | + | 2889 | WP_105162823.1 | DUF927 domain-containing protein | - |
| CLM75_RS22815 () | 5001190..5002032 | + | 843 | WP_105162824.1 | chromosome segregation protein SMC | - |
| CLM75_RS22820 () | 5002126..5002305 | + | 180 | WP_105162825.1 | hypothetical protein | - |
| CLM75_RS22825 () | 5002853..5003239 | + | 387 | WP_105162826.1 | hypothetical protein | - |
| CLM75_RS22835 () | 5004294..5004743 | - | 450 | WP_105162827.1 | hypothetical protein | - |
| CLM75_RS22840 () | 5004745..5005641 | - | 897 | WP_146117467.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CLM75_RS22845 () | 5005768..5006740 | - | 973 | Protein_4444 | hypothetical protein | - |
| CLM75_RS22850 () | 5007174..5007406 | + | 233 | Protein_4445 | integrase | - |
| CLM75_RS22860 () | 5007953..5008390 | + | 438 | WP_069078208.1 | hypothetical protein | - |
| CLM75_RS22865 () | 5008496..5009023 | + | 528 | WP_105162829.1 | hypothetical protein | - |
| CLM75_RS22870 () | 5009154..5009372 | - | 219 | WP_105162830.1 | hypothetical protein | - |
| CLM75_RS22875 () | 5010375..5011121 | + | 747 | WP_105162831.1 | hypothetical protein | - |
| CLM75_RS22880 () | 5011737..5012639 | - | 903 | WP_105162832.1 | LysR family transcriptional regulator | - |
| CLM75_RS22885 () | 5012737..5013747 | + | 1011 | WP_034109265.1 | zinc-binding alcohol dehydrogenase family protein | - |
| CLM75_RS22890 () | 5013846..5014145 | + | 300 | WP_034109382.1 | antibiotic biosynthesis monooxygenase | - |
| CLM75_RS22895 () | 5014765..5015145 | + | 381 | WP_105162833.1 | cupin domain-containing protein | - |
| CLM75_RS22900 () | 5015306..5015590 | - | 285 | WP_069078203.1 | hypothetical protein | - |
| CLM75_RS22905 () | 5015621..5016517 | - | 897 | WP_034109269.1 | hypothetical protein | - |
| CLM75_RS22910 () | 5016736..5017065 | + | 330 | WP_069078201.1 | hypothetical protein | - |
| CLM75_RS22915 () | 5017072..5017707 | - | 636 | WP_034109271.1 | LysE family translocator | - |
| CLM75_RS22920 () | 5017865..5018236 | + | 372 | WP_098467339.1 | PH domain-containing protein | - |
| CLM75_RS22925 () | 5018356..5018931 | - | 576 | WP_034109273.1 | PIN domain-containing protein | Toxin Detail |
| CLM75_RS22930 () | 5018928..5019398 | - | 471 | WP_034109274.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CLM75_RS22935 () | 5019591..5020754 | + | 1164 | WP_105162834.1 | S-type pyocin domain-containing protein | - |
| CLM75_RS22940 () | 5020769..5021056 | + | 288 | WP_105162835.1 | cloacin | - |
| CLM75_RS22945 () | 5021073..5021561 | + | 489 | WP_105163163.1 | hypothetical protein | - |
| CLM75_RS22950 () | 5021572..5022144 | - | 573 | WP_034109277.1 | hypothetical protein | - |
| CLM75_RS22955 () | 5022529..5023881 | - | 1353 | WP_034109278.1 | sensor histidine kinase | - |
| CLM75_RS22960 () | 5023878..5024540 | - | 663 | WP_034109279.1 | response regulator | - |
| CLM75_RS22965 () | 5024688..5024954 | + | 267 | WP_015885790.1 | PepSY domain-containing protein | - |
| CLM75_RS22970 () | 5024954..5025499 | + | 546 | WP_034109280.1 | cytochrome b/b6 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|