MGE detailed information
MGE type: Prophage MGE length: 77461 bp
Accession: NZ_CP023257 Location: 1376915..1454375 Organism: Bacillus subtilis strain TLO3 Replicon: chromosome
Accession: NZ_CP023257 Location: 1376915..1454375 Organism: Bacillus subtilis strain TLO3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLD04_RS07350 () | 1372342..1373784 | + | 1443 | WP_095843647.1 | tagaturonate reductase | - |
| CLD04_RS07355 () | 1373781..1375274 | + | 1494 | WP_041333913.1 | altronate dehydratase family protein | - |
| CLD04_RS07360 () | 1375313..1376077 | - | 765 | WP_017697316.1 | sulfite exporter TauE/SafE family protein | - |
| CLD04_RS07365 () | 1376302..1376766 | - | 465 | WP_014479541.1 | DinB family protein | - |
| CLD04_RS07370 () | 1376915..1378186 | + | 1272 | WP_003245490.1 | ATPase YjoB | - |
| CLD04_RS07375 () | 1378331..1379467 | + | 1137 | WP_010886491.1 | response regulator aspartate phosphatase RapA | - |
| CLD04_RS07380 () | 1379457..1379591 | + | 135 | WP_003245487.1 | phosphatase RapA inhibitor PhrA | - |
| CLD04_RS07385 () | 1379622..1379879 | - | 258 | WP_003232731.1 | YciI family protein | - |
| CLD04_RS07390 () | 1380000..1380953 | + | 954 | WP_003244876.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CLD04_RS07395 () | 1380993..1381370 | - | 378 | WP_003245254.1 | PH domain-containing protein | - |
| CLD04_RS07400 () | 1381476..1382078 | + | 603 | WP_041344770.1 | poly-gamma-glutamate hydrolase family protein | - |
| CLD04_RS07405 () | 1382155..1382991 | + | 837 | WP_041333900.1 | manganese catalase family protein | - |
| CLD04_RS07410 () | 1383035..1383631 | - | 597 | WP_015715727.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CLD04_RS07415 () | 1383794..1384135 | - | 342 | WP_017695142.1 | helix-turn-helix domain-containing protein | - |
| CLD04_RS07420 () | 1384314..1384493 | + | 180 | WP_015715728.1 | hypothetical protein | - |
| CLD04_RS07425 () | 1384480..1385316 | + | 837 | WP_003245799.1 | phage-like element PBSX protein XkdB | - |
| CLD04_RS07430 () | 1385216..1386016 | + | 801 | WP_015252287.1 | ATP-binding protein | - |
| CLD04_RS07435 () | 1386016..1386183 | + | 168 | WP_003245588.1 | hypothetical protein | - |
| CLD04_RS07440 () | 1386268..1386618 | + | 351 | WP_003245290.1 | phage-like element PBSX protein XkdD | - |
| CLD04_RS07445 () | 1386615..1386821 | + | 207 | WP_003244900.1 | phage-like element PBSX protein XtrA | - |
| CLD04_RS07450 () | 1386937..1387446 | + | 510 | WP_017695139.1 | sigma-70 family RNA polymerase sigma factor | - |
| CLD04_RS07455 () | 1387563..1388360 | + | 798 | WP_015715733.1 | phage terminase small subunit | - |
| CLD04_RS07460 () | 1388357..1389658 | + | 1302 | WP_095843648.1 | PBSX family phage terminase large subunit | - |
| CLD04_RS07465 () | 1389662..1391149 | + | 1488 | WP_003245427.1 | phage portal protein | - |
| CLD04_RS07470 () | 1391169..1391996 | + | 828 | WP_003245836.1 | phage-like element PBSX protein XkdF | - |
| CLD04_RS07475 () | 1392022..1392957 | + | 936 | WP_003232690.1 | phage-like element PBSX protein XkdG | - |
| CLD04_RS07480 () | 1392979..1393362 | + | 384 | WP_029317668.1 | DUF3199 family protein | - |
| CLD04_RS07485 () | 1393359..1393715 | + | 357 | WP_041351209.1 | YqbH/XkdH family protein | - |
| CLD04_RS07490 () | 1393712..1394197 | + | 486 | WP_041351210.1 | HK97 gp10 family phage protein | - |
| CLD04_RS07495 () | 1394210..1394650 | + | 441 | WP_041351211.1 | hypothetical protein | - |
| CLD04_RS07500 () | 1394654..1394872 | + | 219 | WP_003232679.1 | hypothetical protein | - |
| CLD04_RS07505 () | 1394869..1396269 | + | 1401 | WP_003245369.1 | phage-like element PBSX protein XkdK | - |
| CLD04_RS07510 () | 1396271..1396714 | + | 444 | WP_003239114.1 | phage tail tube protein | - |
| CLD04_RS07515 () | 1396805..1397251 | + | 447 | WP_003232676.1 | phage-like element PBSX protein XkdN | - |
| CLD04_RS07520 () | 1397281..1397430 | + | 150 | WP_003239113.1 | hypothetical protein | - |
| CLD04_RS07525 () | 1397432..1401313 | + | 3882 | WP_095843649.1 | transglycosylase SLT domain-containing protein | - |
| CLD04_RS07530 () | 1401306..1401965 | + | 660 | WP_003232674.1 | LysM peptidoglycan-binding domain-containing protein | - |
| CLD04_RS07535 () | 1401981..1402958 | + | 978 | WP_003245730.1 | phage-like element PBSX protein XkdQ | - |
| CLD04_RS07540 () | 1402958..1403224 | + | 267 | WP_003244812.1 | DUF2577 family protein | - |
| CLD04_RS07545 () | 1403281..1403706 | + | 426 | WP_003232671.1 | DUF2634 domain-containing protein | - |
| CLD04_RS07550 () | 1403699..1404745 | + | 1047 | WP_003232669.1 | baseplate J/gp47 family protein | - |
| CLD04_RS07555 () | 1404729..1405307 | + | 579 | WP_003244743.1 | YmfQ family protein | - |
| CLD04_RS07560 () | 1405304..1405576 | + | 273 | WP_003232665.1 | hypothetical protein | - |
| CLD04_RS07565 () | 1405579..1408020 | + | 2442 | WP_095843650.1 | pyocin knob domain-containing protein | - |
| CLD04_RS07570 () | 1408038..1408364 | + | 327 | WP_095843651.1 | XkdW family protein | - |
| CLD04_RS07575 () | 1408361..1408525 | + | 165 | WP_015252267.1 | XkdX family protein | - |
| CLD04_RS07580 () | 1408572..1409411 | + | 840 | WP_041351214.1 | phage-like element PBSX protein XepA | - |
| CLD04_RS07585 () | 1409464..1409733 | + | 270 | WP_041351215.1 | hemolysin XhlA family protein | - |
| CLD04_RS07590 () | 1409746..1410009 | + | 264 | WP_041351216.1 | phage holin | - |
| CLD04_RS07595 () | 1410022..1410915 | + | 894 | WP_095843652.1 | Choline transport ATP-binding protein OpuBA | VF |
| CLD04_RS21565 () | 1410952..1411089 | - | 138 | WP_003232648.1 | three component toxin-antitoxin-antitoxin system antitoxin SpoIISC | - |
| CLD04_RS07600 () | 1411175..1411345 | - | 171 | WP_003232646.1 | three component toxin-antitoxin-antitoxin system antitoxin SpoIISB | Antitoxin Detail |
| CLD04_RS07605 () | 1411345..1412091 | - | 747 | WP_089172519.1 | toxin-antitoxin-antitoxin system toxin SpoIISA | Toxin Detail |
| CLD04_RS07610 () | 1412201..1413202 | - | 1002 | WP_014479569.1 | inorganic phosphate transporter | - |
| CLD04_RS07615 () | 1413215..1413832 | - | 618 | WP_003218470.1 | DUF47 domain-containing protein | - |
| CLD04_RS07620 () | 1414108..1415424 | - | 1317 | WP_041351218.1 | serine/threonine exchanger | - |
| CLD04_RS07625 () | 1415813..1416763 | + | 951 | WP_014476561.1 | ring-cleaving dioxygenase | - |
| CLD04_RS07630 () | 1416981..1419149 | + | 2169 | WP_095843653.1 | glycosyltransferase family 39 protein | - |
| CLD04_RS07635 () | 1419161..1420132 | + | 972 | WP_003232632.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| CLD04_RS21815 () | 1420316..1420492 | - | 177 | WP_003245413.1 | hypothetical protein | - |
| CLD04_RS07640 () | 1420650..1421999 | - | 1350 | WP_041333853.1 | Protein YhgF | VF |
| CLD04_RS07645 () | 1422168..1422986 | + | 819 | WP_041333850.1 | pyrroline-5-carboxylate reductase | - |
| CLD04_RS07650 () | 1423115..1423939 | + | 825 | WP_095843654.1 | D-aminopeptidase DppA | - |
| CLD04_RS07655 () | 1423956..1424882 | + | 927 | WP_003245446.1 | dipeptide ABC transporter permease DppB | - |
| CLD04_RS07660 () | 1424888..1425850 | + | 963 | WP_014476568.1 | dipeptide ABC transporter permease DppC | - |
| CLD04_RS07665 () | 1425855..1426862 | + | 1008 | WP_015252254.1 | Methionine aminopeptidase 1 | VF |
| CLD04_RS07670 () | 1426865..1428514 | + | 1650 | WP_095844133.1 | dipeptide ABC transporter substrate-binding protein DppE | - |
| CLD04_RS07675 () | 1428602..1429561 | + | 960 | WP_095843655.1 | LD-carboxypeptidase | - |
| CLD04_RS07680 () | 1429558..1430658 | + | 1101 | WP_095843656.1 | L-Ala-D/L-Glu epimerase | - |
| CLD04_RS07685 () | 1430655..1431545 | + | 891 | WP_095843657.1 | tRNA-specific adenosine deaminase | VF |
| CLD04_RS07690 () | 1431558..1432547 | + | 990 | WP_003232600.1 | ATP-binding cassette domain-containing protein | - |
| CLD04_RS07695 () | 1432590..1433639 | - | 1050 | WP_095843658.1 | 6-phosphogluconolactonase | - |
| CLD04_RS07700 () | 1433729..1434583 | - | 855 | WP_041056063.1 | dimethylarginine dimethylaminohydrolase family protein | - |
| CLD04_RS07705 () | 1434743..1435261 | + | 519 | WP_095844134.1 | acyl-CoA thioesterase | - |
| CLD04_RS07710 () | 1435500..1436702 | + | 1203 | WP_041056061.1 | NO-inducible flavohemoprotein | - |
| CLD04_RS07715 () | 1436779..1436995 | - | 217 | Protein_1444 | hypothetical protein | - |
| CLD04_RS07720 () | 1437140..1437871 | + | 732 | WP_095843659.1 | DUF421 domain-containing protein | - |
| CLD04_RS07725 () | 1437963..1438490 | + | 528 | WP_021479444.1 | DinB family protein | - |
| CLD04_RS07730 () | 1438480..1438998 | + | 519 | WP_095843660.1 | GNAT family N-acetyltransferase | - |
| CLD04_RS07735 () | 1439220..1439558 | + | 339 | WP_015383469.1 | multidrug efflux SMR transporter subunit YkkC | - |
| CLD04_RS07740 () | 1439558..1439875 | + | 318 | WP_015252242.1 | multidrug efflux SMR transporter subunit YkkD | - |
| CLD04_RS07745 () | 1439946..1440848 | + | 903 | WP_041056054.1 | formyltetrahydrofolate deformylase | - |
| CLD04_RS07750 () | 1441199..1442296 | + | 1098 | WP_014479591.1 | glutamate 5-kinase | - |
| CLD04_RS07755 () | 1442308..1443555 | + | 1248 | WP_041056048.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CLD04_RS07760 () | 1443681..1444106 | + | 426 | WP_041333815.1 | organic hydroperoxide resistance protein | - |
| CLD04_RS07765 () | 1444138..1444581 | - | 444 | WP_003245653.1 | organic hydroperoxide resistance transcriptional regulator OhrR | - |
| CLD04_RS07770 () | 1444724..1445134 | + | 411 | WP_003232570.1 | organic hydroperoxide resistance protein | - |
| CLD04_RS07775 () | 1445169..1445338 | + | 170 | Protein_1456 | hypothetical protein | - |
| CLD04_RS07780 () | 1445387..1445857 | - | 471 | WP_017695094.1 | guanine deaminase | - |
| CLD04_RS07785 () | 1445992..1446618 | + | 627 | WP_017695093.1 | histidine phosphatase family protein | - |
| CLD04_RS07790 () | 1446657..1448945 | - | 2289 | WP_017695092.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| CLD04_RS07795 () | 1449361..1450320 | - | 960 | WP_017695091.1 | serine protease Isp | - |
| CLD04_RS07800 () | 1450543..1451376 | + | 834 | WP_003232560.1 | RsbT co-antagonist RsbRB | - |
| CLD04_RS07805 () | 1451407..1452171 | - | 765 | WP_017695090.1 | HMP/thiamine ABC transporter permease ThiX | - |
| CLD04_RS07810 () | 1452146..1453789 | - | 1644 | WP_041337628.1 | energy-coupling factor ABC transporter ATP-binding protein | - |
| CLD04_RS07815 () | 1453776..1454375 | - | 600 | WP_003232554.1 | ECF transporter S component | - |
| CLD04_RS07820 () | 1454377..1454979 | - | 603 | WP_041337632.1 | HMP/thiamine ABC transporter substrate-binding protein ThiU | - |
| CLD04_RS07825 () | 1455291..1455977 | + | 687 | WP_038428855.1 | two-component system response regulator YkoG | - |
| CLD04_RS07830 () | 1455981..1457345 | + | 1365 | WP_095843661.1 | two-component system sensor histidine kinase YkoH | - |
| CLD04_RS07835 () | 1457342..1458022 | + | 681 | WP_017695084.1 | PepSY domain-containing protein | - |
| CLD04_RS07840 () | 1458114..1458626 | + | 513 | WP_014479606.1 | PepSY domain-containing protein | - |
| CLD04_RS07845 () | 1458709..1458846 | + | 138 | WP_003218541.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|