MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96317 bp
Accession: NZ_CP023256 Location: 2197161..2293477 Organism: Alcaligenes faecalis strain c16 Replicon: chromosome
Accession: NZ_CP023256 Location: 2197161..2293477 Organism: Alcaligenes faecalis strain c16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLH39_RS09965 () | 2192608..2193171 | - | 564 | WP_203144570.1 | YceI family protein | - |
| CLH39_RS09970 () | 2193168..2193737 | - | 570 | WP_203144571.1 | cytochrome b | - |
| CLH39_RS09975 () | 2193953..2194537 | + | 585 | WP_115633719.1 | hypothetical protein | - |
| CLH39_RS09980 () | 2194694..2195059 | - | 366 | WP_035271682.1 | variant SH3 domain-containing protein | - |
| CLH39_RS09985 () | 2195240..2196364 | + | 1125 | WP_203144572.1 | site-specific integrase | - |
| CLH39_RS09990 () | 2196438..2196899 | + | 462 | WP_035271679.1 | GNAT family N-acetyltransferase | - |
| CLH39_RS09995 () | 2197054..2199165 | - | 2112 | WP_137430341.1 | hypothetical protein | - |
| CLH39_RS10000 () | 2199177..2199617 | - | 441 | WP_083053504.1 | aegerolysin family protein | - |
| CLH39_RS10005 () | 2199913..2200104 | + | 192 | WP_203144573.1 | hypothetical protein | - |
| CLH39_RS10010 () | 2200159..2200920 | + | 762 | WP_035271677.1 | putative oxidoreductase YgfF | VF |
| CLH39_RS10015 () | 2201080..2202024 | + | 945 | WP_115633714.1 | ParA family protein | - |
| CLH39_RS10020 () | 2202177..2203766 | + | 1590 | WP_115633713.1 | hypothetical protein | - |
| CLH39_RS10025 () | 2203763..2204368 | + | 606 | WP_115633712.1 | DUF2857 family protein | - |
| CLH39_RS10030 () | 2204375..2204971 | + | 597 | WP_115633711.1 | hypothetical protein | - |
| CLH39_RS10035 () | 2206212..2206613 | + | 402 | WP_203145874.1 | hypothetical protein | - |
| CLH39_RS10040 () | 2206798..2207187 | + | 390 | WP_115633710.1 | hypothetical protein | - |
| CLH39_RS10045 () | 2207235..2208353 | + | 1119 | WP_203144574.1 | TIGR03761 family integrating conjugative element protein | - |
| CLH39_RS10050 () | 2208385..2208879 | + | 495 | WP_203144575.1 | hypothetical protein | - |
| CLH39_RS10055 () | 2208946..2209362 | + | 417 | WP_203144576.1 | single-stranded DNA-binding protein | - |
| CLH39_RS10060 () | 2209783..2210616 | - | 834 | WP_203144577.1 | HTH-type transcriptional regulator GltR | VF |
| CLH39_RS10065 () | 2210810..2211715 | + | 906 | WP_203144578.1 | NADPH:quinone reductase | - |
| CLH39_RS10070 () | 2211931..2212311 | + | 381 | WP_203144579.1 | IS66 family transposase ISAeh1 | Transposase |
| CLH39_RS10075 () | 2212308..2212484 | + | 177 | WP_203144580.1 | transposase domain-containing protein | - |
| CLH39_RS10080 () | 2212720..2213184 | - | 465 | WP_203144581.1 | hypothetical protein | - |
| CLH39_RS10085 () | 2213181..2213675 | - | 495 | WP_203144582.1 | MarR family transcriptional regulator | - |
| CLH39_RS10090 () | 2213893..2214291 | - | 399 | WP_203144583.1 | cupin domain-containing protein | - |
| CLH39_RS10095 () | 2214419..2215366 | - | 948 | WP_203144584.1 | PDR/VanB family oxidoreductase | - |
| CLH39_RS10100 () | 2215489..2216469 | - | 981 | WP_203144585.1 | Transcriptional activator FeaR | VF |
| CLH39_RS10105 () | 2218010..2218630 | + | 621 | WP_203144586.1 | Ferrichrome outer membrane transporter/phage receptor | VF |
| CLH39_RS10110 () | 2218841..2220229 | + | 1389 | WP_203144587.1 | TonB-dependent receptor | - |
| CLH39_RS10115 () | 2220240..2221091 | + | 852 | WP_203144588.1 | DJ-1/PfpI family protein | - |
| CLH39_RS10120 () | 2221339..2222223 | - | 885 | WP_203145875.1 | MBL fold metallo-hydrolase | - |
| CLH39_RS10125 () | 2222289..2222837 | - | 549 | WP_203144589.1 | cysteine hydrolase | - |
| CLH39_RS10130 () | 2222935..2223920 | + | 986 | Protein_1996 | GlxA family transcriptional regulator | - |
| CLH39_RS10135 () | 2224184..2224618 | - | 435 | WP_203144590.1 | CopD family protein | - |
| CLH39_RS10140 () | 2224615..2224980 | - | 366 | WP_203144591.1 | DUF3817 domain-containing protein | - |
| CLH39_RS10145 () | 2225023..2225991 | + | 969 | WP_203144592.1 | HTH-type transcriptional regulator CdhR | VF |
| CLH39_RS10150 () | 2226005..2227333 | + | 1329 | WP_203144593.1 | Ferric-pseudobactin 358 receptor | VF |
| CLH39_RS10155 () | 2227758..2228456 | + | 699 | WP_203144594.1 | DUF3577 domain-containing protein | - |
| CLH39_RS10160 () | 2228869..2229483 | + | 615 | WP_203144595.1 | DUF3275 family protein | - |
| CLH39_RS10165 () | 2230015..2230290 | + | 276 | WP_115633700.1 | hypothetical protein | - |
| CLH39_RS10170 () | 2230368..2230676 | + | 309 | WP_203144596.1 | hypothetical protein | - |
| CLH39_RS10175 () | 2231310..2231615 | + | 306 | WP_203144597.1 | hypothetical protein | - |
| CLH39_RS10180 () | 2231539..2232732 | + | 1194 | WP_203144598.1 | SAM-dependent methyltransferase | - |
| CLH39_RS10185 () | 2233043..2233570 | + | 528 | WP_203145876.1 | DNA repair protein RadC | - |
| CLH39_RS10190 () | 2233680..2234021 | + | 342 | WP_203144599.1 | hypothetical protein | - |
| CLH39_RS10195 () | 2234103..2234591 | + | 489 | Protein_2009 | hypothetical protein | - |
| CLH39_RS10200 () | 2234638..2236140 | - | 1503 | WP_203144600.1 | PepSY domain-containing protein | - |
| CLH39_RS10205 () | 2236153..2238366 | - | 2214 | WP_203144601.1 | TonB-dependent receptor | - |
| CLH39_RS10210 () | 2239396..2239911 | - | 516 | WP_203144602.1 | copper chaperone PCu(A)C | - |
| CLH39_RS10215 () | 2239956..2241596 | - | 1641 | WP_203144603.1 | CopD family protein | - |
| CLH39_RS10220 () | 2241593..2242912 | - | 1320 | WP_203144604.1 | hypothetical protein | - |
| CLH39_RS10225 () | 2242920..2243498 | - | 579 | WP_203144605.1 | methanobactin biosynthesis cassette protein MbnC | - |
| CLH39_RS10230 () | 2243482..2244306 | - | 825 | WP_203144606.1 | methanobactin biosynthesis cassette protein MbnB | - |
| CLH39_RS10235 () | 2244374..2244469 | - | 96 | WP_123049410.1 | methanobactin | - |
| CLH39_RS10240 () | 2244657..2245793 | - | 1137 | WP_203144607.1 | di-heme enzyme | - |
| CLH39_RS10245 () | 2245809..2246714 | - | 906 | WP_203144608.1 | metallo-mystery pair system four-Cys motif protein | - |
| CLH39_RS10250 () | 2246728..2248860 | - | 2133 | WP_203144609.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| CLH39_RS10255 () | 2248895..2249347 | - | 453 | WP_203144610.1 | DUF2946 family protein | - |
| CLH39_RS10260 () | 2249496..2249816 | - | 321 | WP_203144611.1 | hypothetical protein | VF |
| CLH39_RS10265 () | 2249915..2250808 | - | 894 | WP_149721194.1 | hypothetical protein | - |
| CLH39_RS10270 () | 2250820..2251419 | - | 600 | WP_203144612.1 | hypothetical protein | - |
| CLH39_RS10275 () | 2251432..2252190 | - | 759 | WP_203144613.1 | DsbC family protein | - |
| CLH39_RS10280 () | 2252212..2252721 | - | 510 | WP_203144614.1 | PH domain-containing protein | - |
| CLH39_RS10285 () | 2252793..2253599 | - | 807 | WP_203144615.1 | SprT-like domain-containing protein | - |
| CLH39_RS10290 () | 2254531..2254797 | + | 267 | WP_149721199.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CLH39_RS10295 () | 2254797..2255072 | + | 276 | WP_149721200.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CLH39_RS10300 () | 2255176..2255394 | + | 219 | WP_149721201.1 | DUF3018 family protein | Antitoxin Detail |
| CLH39_RS10305 () | 2255441..2255659 | + | 219 | WP_149721202.1 | hypothetical protein | - |
| CLH39_RS10310 () | 2255900..2256892 | + | 993 | WP_203144616.1 | hypothetical protein | - |
| CLH39_RS10315 () | 2256903..2257544 | - | 642 | WP_149721204.1 | hypothetical protein | - |
| CLH39_RS10320 () | 2257710..2259338 | - | 1629 | WP_203144617.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CLH39_RS10325 () | 2259353..2259754 | - | 402 | WP_009454051.1 | hypothetical protein | - |
| CLH39_RS10330 () | 2259751..2261142 | - | 1392 | WP_003799934.1 | integrating conjugative element protein | - |
| CLH39_RS10335 () | 2261162..2262478 | - | 1317 | WP_051316214.1 | TraU family protein | - |
| CLH39_RS10340 () | 2262518..2262997 | - | 480 | WP_203144618.1 | TIGR03757 family integrating conjugative element protein | - |
| CLH39_RS10345 () | 2262994..2265915 | - | 2922 | WP_203144619.1 | conjugative transfer ATPase | - |
| CLH39_RS10350 () | 2265905..2266414 | - | 510 | WP_203144620.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CLH39_RS10355 () | 2266401..2267975 | - | 1575 | WP_203144621.1 | TIGR03752 family integrating conjugative element protein | - |
| CLH39_RS10360 () | 2267991..2269151 | - | 1161 | WP_149721210.1 | TIGR03749 family integrating conjugative element protein | - |
| CLH39_RS10365 () | 2269163..2269963 | - | 801 | WP_080584946.1 | TIGR03746 family integrating conjugative element protein | - |
| CLH39_RS10370 () | 2269960..2270499 | - | 540 | WP_009454033.1 | TIGR03750 family conjugal transfer protein | - |
| CLH39_RS10375 () | 2270515..2270925 | - | 411 | WP_203144622.1 | DUF2976 domain-containing protein | - |
| CLH39_RS10380 () | 2270971..2271222 | - | 252 | WP_021446579.1 | DUF3262 family protein | - |
| CLH39_RS10385 () | 2271245..2271571 | - | 327 | WP_009454029.1 | RAQPRD family integrative conjugative element protein | - |
| CLH39_RS10390 () | 2271612..2272394 | - | 783 | WP_009454027.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CLH39_RS10395 () | 2272391..2274655 | - | 2265 | WP_203144623.1 | type IV conjugative transfer system coupling protein TraD | - |
| CLH39_RS10400 () | 2274645..2275196 | - | 552 | WP_203144624.1 | integrating conjugative element protein | - |
| CLH39_RS10405 () | 2275186..2275977 | - | 792 | WP_203144625.1 | transglycosylase SLT domain-containing protein | - |
| CLH39_RS10410 () | 2275989..2276561 | - | 573 | WP_003799964.1 | hypothetical protein | - |
| CLH39_RS10415 () | 2276561..2277787 | - | 1227 | WP_203144626.1 | hypothetical protein | - |
| CLH39_RS10420 () | 2277784..2278338 | - | 555 | WP_045931322.1 | hypothetical protein | VF |
| CLH39_RS10425 () | 2278869..2279408 | + | 540 | WP_131071802.1 | hypothetical protein | - |
| CLH39_RS10430 () | 2279568..2281895 | + | 2328 | WP_203144627.1 | TraI domain-containing protein | - |
| CLH39_RS10435 () | 2282248..2283777 | + | 1530 | WP_060185086.1 | polyphosphate:AMP phosphotransferase | - |
| CLH39_RS10440 () | 2283852..2284310 | - | 459 | WP_035271590.1 | hypothetical protein | - |
| CLH39_RS10445 () | 2284329..2285531 | - | 1203 | WP_060185305.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CLH39_RS10450 () | 2285682..2287271 | - | 1590 | WP_115633665.1 | multicopper oxidase family protein | - |
| CLH39_RS10455 () | 2287854..2288921 | - | 1068 | WP_203144628.1 | DNA-binding protein | - |
| CLH39_RS10460 () | 2289111..2290310 | + | 1200 | WP_203144629.1 | Tyrosine recombinase XerC | VF |
| CLH39_RS10465 () | 2290458..2291390 | + | 933 | WP_203144630.1 | HTH-type transcriptional regulator DmlR | VF |
| CLH39_RS10470 () | 2291494..2292165 | + | 672 | WP_060185081.1 | DsbA family protein | - |
| CLH39_RS10475 () | 2292211..2293236 | + | 1026 | WP_035271584.1 | cyclase family protein | - |
| CLH39_RS10480 () | 2293407..2293847 | + | 441 | WP_060185080.1 | YtoQ family protein | - |
| CLH39_RS10485 () | 2293996..2296458 | - | 2463 | WP_203144631.1 | heavy metal translocating P-type ATPase | - |
| CLH39_RS10490 () | 2296403..2296582 | + | 180 | WP_021446589.1 | hypothetical protein | - |
| CLH39_RS10495 () | 2296598..2296915 | - | 318 | WP_026482562.1 | DUF4148 domain-containing protein | - |
| CLH39_RS10500 () | 2297055..2298008 | + | 954 | WP_026482563.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|