MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 97439 bp
Accession: NZ_CP023255 Location: 489609..587047 Organism: Pseudomonas aeruginosa strain CCUG 70744 Replicon: chromosome
Accession: NZ_CP023255 Location: 489609..587047 Organism: Pseudomonas aeruginosa strain CCUG 70744 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLH63_RS02565 () | 485514..486134 | - | 621 | WP_010487132.1 | glutathione S-transferase | - |
| CLH63_RS02570 () | 486524..487117 | + | 594 | WP_010953412.1 | TetR/AcrR family transcriptional regulator | - |
| CLH63_RS02575 () | 487230..488264 | + | 1035 | WP_010953413.1 | NADP-dependent oxidoreductase | - |
| CLH63_RS02580 () | 488385..488627 | + | 243 | WP_004574300.1 | hypothetical protein | - |
| CLH63_RS02585 () | 488727..489188 | + | 462 | WP_010953414.1 | (2Fe-2S)-binding protein | - |
| CLH63_RS02590 () | 489190..491382 | + | 2193 | WP_010953415.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| CLH63_RS02595 () | 491393..492613 | + | 1221 | WP_023464840.1 | cytochrome c | - |
| CLH63_RS02600 () | 492627..493835 | + | 1209 | WP_023464839.1 | XdhC family protein | - |
| CLH63_RS02605 () | 493864..494202 | + | 339 | WP_004574290.1 | antibiotic biosynthesis monooxygenase | - |
| CLH63_RS02610 () | 494199..495167 | + | 969 | WP_023464838.1 | radical SAM protein | - |
| CLH63_RS02615 () | 495145..495744 | - | 600 | WP_023464837.1 | nucleotidyltransferase family protein | - |
| CLH63_RS02620 () | 496027..496332 | - | 306 | WP_010953420.1 | ArsR family transcriptional regulator | - |
| CLH63_RS02625 () | 496471..497454 | - | 984 | WP_010953421.1 | LLM class oxidoreductase | - |
| CLH63_RS02630 () | 497521..498645 | - | 1125 | WP_010953422.1 | alkene reductase | - |
| CLH63_RS02635 () | 498708..500207 | - | 1500 | WP_023464836.1 | aldehyde dehydrogenase family protein | - |
| CLH63_RS02640 () | 500459..501850 | - | 1392 | WP_010487163.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CLH63_RS02645 () | 501969..503069 | - | 1101 | WP_010953424.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| CLH63_RS02650 () | 503436..504260 | - | 825 | WP_010953425.1 | NADPH-dependent oxidoreductase | - |
| CLH63_RS02655 () | 504330..504632 | - | 303 | WP_010487168.1 | DUF1330 domain-containing protein | - |
| CLH63_RS02660 () | 504642..505319 | - | 678 | WP_010953426.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| CLH63_RS02665 () | 505402..506559 | - | 1158 | WP_010953427.1 | iron-containing alcohol dehydrogenase | - |
| CLH63_RS02670 () | 507000..507359 | - | 360 | Protein_512 | DNA repair protein RadC | - |
| CLH63_RS02675 () | 507331..508281 | - | 951 | WP_031299400.1 | hypothetical protein | - |
| CLH63_RS02680 () | 508374..509378 | - | 1005 | WP_010953429.1 | YqaJ viral recombinase family protein | - |
| CLH63_RS02685 () | 509458..510426 | - | 969 | WP_031299399.1 | DUF932 domain-containing protein | - |
| CLH63_RS02690 () | 510524..510796 | - | 273 | WP_031299398.1 | hypothetical protein | - |
| CLH63_RS02695 () | 511058..511303 | + | 246 | WP_010953432.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CLH63_RS02700 () | 511428..511700 | + | 273 | WP_010953433.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CLH63_RS02705 () | 511688..511981 | + | 294 | WP_010953434.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CLH63_RS02710 () | 511975..513384 | - | 1410 | WP_010953435.1 | site-specific integrase | - |
| CLH63_RS02715 () | 513822..516602 | + | 2781 | WP_023464835.1 | DEAD/DEAH box helicase family protein | - |
| CLH63_RS02720 () | 516599..518380 | + | 1782 | WP_023464834.1 | restriction endonuclease subunit S | - |
| CLH63_RS02725 () | 518383..520113 | + | 1731 | WP_023464833.1 | AAA family ATPase | - |
| CLH63_RS33110 () | 520110..520922 | + | 813 | WP_124075259.1 | hypothetical protein | - |
| CLH63_RS02735 () | 520924..522445 | + | 1522 | Protein_525 | SAM-dependent DNA methyltransferase | - |
| CLH63_RS02740 () | 522463..523455 | + | 993 | WP_031299396.1 | restriction endonuclease | - |
| CLH63_RS02745 () | 523470..523667 | + | 198 | WP_031301190.1 | AlpA family transcriptional regulator | - |
| CLH63_RS02750 () | 523781..528910 | + | 5130 | WP_023464828.1 | RecQ family ATP-dependent DNA helicase | - |
| CLH63_RS02755 () | 529071..529458 | + | 388 | Protein_529 | hypothetical protein | - |
| CLH63_RS02760 () | 529509..531212 | - | 1704 | WP_023464826.1 | 50S ribosome-binding GTPase | - |
| CLH63_RS02765 () | 531212..534451 | - | 3240 | WP_023835792.1 | DUF726 domain-containing protein | - |
| CLH63_RS02775 () | 534855..535859 | - | 1005 | WP_031636417.1 | WYL domain-containing protein | - |
| CLH63_RS02780 () | 535933..538833 | - | 2901 | WP_023835778.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| CLH63_RS02785 () | 539065..540414 | - | 1350 | WP_023464820.1 | hypothetical protein | - |
| CLH63_RS02790 () | 540411..546707 | - | 6297 | WP_023835777.1 | DUF4011 domain-containing protein | - |
| CLH63_RS02795 () | 546722..547360 | - | 639 | WP_003090610.1 | radical SAM protein | - |
| CLH63_RS02800 () | 547362..549245 | - | 1884 | WP_023464818.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| CLH63_RS02805 () | 549322..549861 | - | 540 | WP_003122572.1 | hypothetical protein | - |
| CLH63_RS02810 () | 549936..550214 | - | 279 | WP_003119461.1 | hypothetical protein | - |
| CLH63_RS02815 () | 550244..550636 | - | 393 | WP_003114392.1 | GFA family protein | - |
| CLH63_RS02820 () | 550668..551147 | - | 480 | WP_003119462.1 | VOC family protein | - |
| CLH63_RS02825 () | 551340..551978 | + | 639 | WP_023118050.1 | hypothetical protein | - |
| CLH63_RS02830 () | 552138..552824 | - | 687 | WP_017001898.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| CLH63_RS02835 () | 552924..553412 | - | 489 | WP_003116691.1 | MerR family transcriptional regulator | - |
| CLH63_RS02840 () | 553645..554475 | + | 831 | WP_003101542.1 | alpha/beta hydrolase | - |
| CLH63_RS02845 () | 554825..555070 | - | 246 | WP_031636880.1 | DUF2274 domain-containing protein | - |
| CLH63_RS02850 () | 555067..556341 | - | 1275 | WP_031636881.1 | TrbI/VirB10 family protein | - |
| CLH63_RS02855 () | 556344..557339 | - | 996 | WP_033967817.1 | P-type conjugative transfer protein TrbG | - |
| CLH63_RS02860 () | 557336..558040 | - | 705 | WP_023114200.1 | conjugal transfer protein TrbF | - |
| CLH63_RS02865 () | 558053..559438 | - | 1386 | WP_023114199.1 | P-type conjugative transfer protein TrbL | - |
| CLH63_RS02870 () | 559435..559755 | - | 321 | WP_023114198.1 | hypothetical protein | - |
| CLH63_RS02875 () | 559768..560493 | - | 726 | WP_033967813.1 | P-type conjugative transfer protein TrbJ | - |
| CLH63_RS02880 () | 560515..562941 | - | 2427 | WP_110183890.1 | conjugal transfer protein TrbE | - |
| CLH63_RS02885 () | 562957..563229 | - | 273 | WP_003103993.1 | VirB3 family type IV secretion system protein | - |
| CLH63_RS02890 () | 563226..563609 | - | 384 | WP_031636907.1 | TrbC/VirB2 family protein | - |
| CLH63_RS02895 () | 563606..564658 | - | 1053 | WP_031636909.1 | P-type conjugative transfer ATPase TrbB | - |
| CLH63_RS02900 () | 564655..565119 | - | 465 | WP_003111089.1 | ribbon-helix-helix protein, CopG family | - |
| CLH63_RS02905 () | 565116..567125 | - | 2010 | WP_031636910.1 | conjugal transfer protein TraG | - |
| CLH63_RS02910 () | 567362..567640 | - | 279 | WP_031636913.1 | lipoprotein | - |
| CLH63_RS02915 () | 567637..568581 | - | 945 | WP_023114186.1 | LysR family transcriptional regulator | - |
| CLH63_RS02920 () | 568656..568919 | - | 264 | WP_023114185.1 | hypothetical protein | - |
| CLH63_RS02925 () | 569049..569681 | - | 633 | WP_023114184.1 | hypothetical protein | - |
| CLH63_RS02930 () | 569703..570440 | - | 738 | WP_023114183.1 | HupE/UreJ family protein | - |
| CLH63_RS02935 () | 570546..573686 | - | 3141 | WP_033880256.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| CLH63_RS02940 () | 573697..574926 | - | 1230 | WP_031636927.1 | efflux RND transporter periplasmic adaptor subunit | - |
| CLH63_RS02945 () | 574923..576170 | - | 1248 | WP_031636928.1 | TolC family protein | - |
| CLH63_RS02950 () | 576311..577306 | - | 996 | WP_031636929.1 | M48 family metalloprotease | - |
| CLH63_RS02955 () | 577306..577704 | - | 399 | WP_023114178.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CLH63_RS02960 () | 577814..579799 | - | 1986 | WP_023114177.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| CLH63_RS02970 () | 580247..580846 | - | 600 | WP_023114176.1 | S26 family signal peptidase | - |
| CLH63_RS02975 () | 580843..581367 | - | 525 | WP_023103957.1 | DUF2840 domain-containing protein | - |
| CLH63_RS02980 () | 581364..581648 | - | 285 | WP_023114175.1 | hypothetical protein | - |
| CLH63_RS02985 () | 581645..582283 | - | 639 | WP_033967811.1 | AAA family ATPase | - |
| CLH63_RS02995 () | 582537..583394 | - | 858 | WP_033967809.1 | replication initiator protein A | - |
| CLH63_RS03000 () | 583421..583702 | - | 282 | WP_003107109.1 | helix-turn-helix domain-containing protein | - |
| CLH63_RS03005 () | 583786..584556 | - | 771 | WP_033878703.1 | DUF2285 domain-containing protein | - |
| CLH63_RS03010 () | 584866..585216 | - | 351 | WP_023103962.1 | DUF2958 domain-containing protein | - |
| CLH63_RS03015 () | 585457..585762 | + | 306 | WP_023103963.1 | helix-turn-helix domain-containing protein | - |
| CLH63_RS03020 () | 585826..586140 | - | 315 | WP_023103964.1 | DUF736 domain-containing protein | - |
| CLH63_RS03035 () | 587210..587419 | - | 210 | WP_031636935.1 | hypothetical protein | - |
| CLH63_RS03040 () | 587482..588951 | - | 1470 | WP_031637312.1 | ParB/RepB/Spo0J family partition protein | - |
| CLH63_RS03045 () | 589031..589855 | - | 825 | WP_019396530.1 | DUF945 domain-containing protein | - |
| CLH63_RS03055 () | 590564..590842 | - | 279 | WP_031637040.1 | hypothetical protein | - |
| CLH63_RS03060 () | 590881..591231 | - | 351 | WP_031637043.1 | DUF2958 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|