MGE detailed information
MGE type: Genomic_island MGE length: 19975 bp
Accession: NZ_CP023192 Location: 1259935..1279909 Organism: Bifidobacterium breve strain NRBB08 Replicon: chromosome
Accession: NZ_CP023192 Location: 1259935..1279909 Organism: Bifidobacterium breve strain NRBB08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB08_RS05575 () | 1255477..1256877 | + | 1401 | WP_016462934.1 | amino acid permease | - |
| NRBB08_RS05580 () | 1257240..1257858 | + | 619 | Protein_1039 | MFS transporter | - |
| NRBB08_RS05585 () | 1257882..1258895 | - | 1014 | WP_198553922.1 | VanZ family protein | - |
| NRBB08_RS05590 () | 1259042..1259866 | + | 825 | WP_106622625.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRBB08_RS05595 () | 1259935..1260234 | + | 300 | WP_016462931.1 | DUF2316 family protein | - |
| NRBB08_RS05600 () | 1260275..1260808 | - | 534 | WP_003829402.1 | GNAT family N-acetyltransferase | - |
| NRBB08_RS05605 () | 1260944..1261273 | - | 330 | WP_016462930.1 | hypothetical protein | - |
| NRBB08_RS05625 () | 1262218..1263291 | - | 1074 | WP_007056270.1 | histidine kinase | - |
| NRBB08_RS05630 () | 1263357..1264052 | - | 696 | WP_052790767.1 | response regulator transcription factor | - |
| NRBB08_RS05635 () | 1264178..1264693 | + | 516 | WP_013140733.1 | hypothetical protein | - |
| NRBB08_RS05640 () | 1264690..1265580 | + | 891 | WP_007056280.1 | hypothetical protein | - |
| NRBB08_RS05645 () | 1265577..1266265 | + | 689 | Protein_1049 | putative ABC transporter ATP-binding protein YknY | VF |
| NRBB08_RS05650 () | 1266262..1267431 | + | 1170 | WP_106622626.1 | ABC transporter permease | - |
| NRBB08_RS05655 () | 1267616..1267885 | + | 270 | WP_014483711.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB08_RS05660 () | 1267889..1268182 | + | 294 | WP_014483710.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| NRBB08_RS05670 () | 1268851..1269402 | + | 552 | WP_015438834.1 | ECF RNA polymerase sigma-E factor | VF |
| NRBB08_RS05675 () | 1269436..1270263 | + | 828 | WP_015438835.1 | hypothetical protein | - |
| NRBB08_RS05680 () | 1270395..1271022 | + | 628 | Protein_1055 | hypothetical protein | - |
| NRBB08_RS05685 () | 1271019..1271801 | + | 783 | WP_021649673.1 | hypothetical protein | - |
| NRBB08_RS05690 () | 1271854..1272729 | + | 876 | WP_021649674.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| NRBB08_RS05695 () | 1272783..1273181 | + | 399 | WP_016462921.1 | hypothetical protein | - |
| NRBB08_RS05700 () | 1273276..1273638 | - | 363 | WP_015438840.1 | hypothetical protein | - |
| NRBB08_RS05705 () | 1273762..1274637 | - | 876 | WP_016462920.1 | EamA family transporter | - |
| NRBB08_RS05710 () | 1274841..1275464 | - | 624 | WP_016462919.1 | hypothetical protein | - |
| NRBB08_RS05715 () | 1275461..1276189 | - | 729 | WP_016462918.1 | hypothetical protein | - |
| NRBB08_RS05720 () | 1276192..1276848 | - | 657 | WP_016462917.1 | ATP-binding cassette domain-containing protein | - |
| NRBB08_RS05725 () | 1277385..1277709 | - | 325 | Protein_1064 | Fic family protein | - |
| NRBB08_RS05730 () | 1277706..1277885 | - | 180 | WP_016462915.1 | antitoxin VbhA family protein | - |
| NRBB08_RS05735 () | 1278099..1278740 | + | 642 | WP_003831805.1 | hypothetical protein | - |
| NRBB08_RS10315 () | 1278832..1279125 | + | 294 | WP_198553923.1 | hypothetical protein | - |
| NRBB08_RS10320 () | 1279391..1279609 | + | 219 | WP_198554197.1 | toxin HipA | - |
| NRBB08_RS05750 () | 1279778..1279890 | + | 113 | Protein_1069 | permease | - |
| NRBB08_RS10325 () | 1279925..1280218 | + | 294 | WP_021649853.1 | hypothetical protein | - |
| NRBB08_RS10330 () | 1280362..1280558 | + | 197 | Protein_1071 | permease | - |
| NRBB08_RS05760 () | 1280882..1282462 | + | 1581 | WP_015438846.1 | amino acid permease | - |
| NRBB08_RS05765 () | 1282704..1282943 | - | 240 | WP_014483708.1 | hypothetical protein | - |
| NRBB08_RS05770 () | 1283240..1283593 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| NRBB08_RS10335 () | 1283659..1284087 | - | 429 | WP_003831803.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|