MGE detailed information
MGE type: Prophage MGE length: 18255 bp
Accession: NZ_CP023184 Location: 596329..614583 Organism: Yersinia ruckeri strain NHV_3758 Replicon: chromosome
Accession: NZ_CP023184 Location: 596329..614583 Organism: Yersinia ruckeri strain NHV_3758 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLC90_RS02740 () | 591415..591864 | - | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| CLC90_RS02745 () | 591987..593498 | - | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| CLC90_RS02750 () | 593778..594872 | + | 1095 | WP_004720454.1 | LPS export ABC transporter permease LptF | - |
| CLC90_RS02755 () | 594872..595942 | + | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| CLC90_RS02765 () | 596329..597252 | + | 924 | Protein_528 | integrase arm-type DNA-binding domain-containing protein | - |
| CLC90_RS02775 () | 598668..599360 | - | 693 | WP_096823268.1 | hypothetical protein | - |
| CLC90_RS02780 () | 599706..601835 | + | 2130 | WP_096823269.1 | helix-turn-helix domain-containing protein | - |
| CLC90_RS02790 () | 603000..603944 | - | 945 | WP_038275265.1 | hypothetical protein | - |
| CLC90_RS02795 () | 604459..605718 | + | 1260 | Protein_533 | integrase arm-type DNA-binding domain-containing protein | - |
| CLC90_RS02800 () | 605892..606146 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CLC90_RS02805 () | 606136..606426 | + | 291 | WP_071666901.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CLC90_RS02810 () | 606690..607079 | + | 390 | WP_096823270.1 | restriction endonuclease subunit S | - |
| CLC90_RS02815 () | 607203..607778 | + | 576 | WP_071706520.1 | DUF4433 domain-containing protein | - |
| CLC90_RS02820 () | 607781..608437 | + | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| CLC90_RS02825 () | 608434..609501 | + | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| CLC90_RS02830 () | 609522..609788 | + | 267 | Protein_540 | hypothetical protein | - |
| CLC90_RS02835 () | 609863..610060 | + | 198 | WP_096823273.1 | transposase | - |
| CLC90_RS02840 () | 610000..610497 | + | 498 | Protein_542 | IS30-like element ISYkr1 family transposase | - |
| CLC90_RS02845 () | 610503..611196 | + | 694 | Protein_543 | IS3 family transposase | - |
| CLC90_RS02850 () | 611506..612417 | - | 912 | WP_096823274.1 | EamA family transporter | - |
| CLC90_RS02855 () | 612574..613251 | + | 678 | WP_096823275.1 | hypothetical protein | - |
| CLC90_RS02860 () | 613419..614583 | - | 1165 | Protein_546 | IS3 family transposase | - |
| CLC90_RS02865 () | 614666..614812 | - | 147 | Protein_547 | helix-turn-helix domain-containing protein | - |
| CLC90_RS17750 () | 614919..615009 | + | 91 | Protein_548 | restriction endonuclease subunit M | - |
| CLC90_RS02875 () | 615084..615479 | + | 396 | WP_038245317.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CLC90_RS02880 () | 615472..616421 | + | 950 | Protein_550 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CLC90_RS02885 () | 616770..617054 | + | 285 | WP_081365046.1 | antirestriction protein | - |
| CLC90_RS02895 () | 617717..618871 | + | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|