MGE detailed information
MGE type: Genomic_island MGE length: 13102 bp
Accession: NZ_CP023184 Location: 2962853..2975954 Organism: Yersinia ruckeri strain NHV_3758 Replicon: chromosome
Accession: NZ_CP023184 Location: 2962853..2975954 Organism: Yersinia ruckeri strain NHV_3758 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLC90_RS13625 () | 2958148..2958849 | + | 702 | WP_050297207.1 | WYL domain-containing protein | - |
| CLC90_RS13630 () | 2958855..2959421 | + | 567 | WP_096823569.1 | hypothetical protein | - |
| CLC90_RS13635 () | 2959460..2959912 | + | 453 | WP_096823570.1 | hypothetical protein | - |
| CLC90_RS13640 () | 2959909..2960347 | + | 439 | Protein_2627 | hypothetical protein | - |
| CLC90_RS13645 () | 2960420..2960686 | + | 267 | Protein_2628 | DUF905 family protein | - |
| CLC90_RS13650 () | 2960759..2961580 | + | 822 | WP_096823571.1 | DUF945 domain-containing protein | - |
| CLC90_RS13655 () | 2961611..2962054 | + | 444 | WP_096823572.1 | antirestriction protein | - |
| CLC90_RS13660 () | 2962067..2962609 | + | 543 | WP_096823573.1 | DNA repair protein RadC | - |
| CLC90_RS13665 () | 2962606..2962827 | + | 222 | WP_069325310.1 | DUF987 domain-containing protein | - |
| CLC90_RS13670 () | 2962853..2963218 | + | 366 | WP_096823574.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CLC90_RS13675 () | 2963257..2963586 | + | 330 | WP_096823575.1 | TA system toxin CbtA family protein | Toxin Detail |
| CLC90_RS13680 () | 2963982..2964911 | + | 930 | Protein_2635 | integrase arm-type DNA-binding domain-containing protein | - |
| CLC90_RS13685 () | 2965157..2965711 | + | 555 | WP_096823577.1 | DUF4942 domain-containing protein | - |
| CLC90_RS13690 () | 2965820..2966143 | + | 324 | WP_038277221.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CLC90_RS13695 () | 2966130..2966411 | + | 282 | WP_038277219.1 | helix-turn-helix domain-containing protein | - |
| CLC90_RS13700 () | 2966620..2968160 | - | 1541 | Protein_2639 | IS3 family transposase | - |
| CLC90_RS13705 () | 2968232..2968629 | - | 398 | Protein_2640 | transposase | - |
| CLC90_RS13710 () | 2968858..2969160 | + | 303 | WP_096823578.1 | hypothetical protein | - |
| CLC90_RS13715 () | 2969255..2969977 | + | 723 | WP_071704641.1 | fimbria/pilus periplasmic chaperone | - |
| CLC90_RS13720 () | 2969981..2972632 | + | 2652 | WP_071704640.1 | fimbria/pilus outer membrane usher protein | - |
| CLC90_RS13725 () | 2972679..2973242 | + | 564 | WP_051847020.1 | type 1 fimbrial protein | - |
| CLC90_RS13730 () | 2973423..2974301 | + | 879 | WP_038243517.1 | hypothetical protein | - |
| CLC90_RS13735 () | 2974440..2974628 | + | 189 | Protein_2646 | helix-turn-helix domain-containing protein | - |
| CLC90_RS13745 () | 2975028..2975954 | - | 927 | WP_038276096.1 | LysR family transcriptional regulator | - |
| CLC90_RS13750 () | 2976175..2976491 | + | 317 | Protein_2648 | IS3 family transposase | - |
| CLC90_RS13755 () | 2976488..2976604 | + | 117 | Protein_2649 | DDE-type integrase/transposase/recombinase | - |
| CLC90_RS13760 () | 2977176..2977754 | + | 579 | WP_071665691.1 | DDE-type integrase/transposase/recombinase | - |
| CLC90_RS13765 () | 2977868..2978518 | + | 651 | WP_052173091.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|