MGE detailed information
MGE type: Prophage MGE length: 21788 bp
Accession: NZ_CP023047 Location: 873128..894915 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-186 Replicon: chromosome
Accession: NZ_CP023047 Location: 873128..894915 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-186 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKG20_RS04375 () | 869415..870086 | + | 672 | WP_006253592.1 | outer membrane beta-barrel protein | - |
| CKG20_RS04380 () | 870341..870670 | + | 330 | WP_006250045.1 | thioredoxin | - |
| CKG20_RS04385 () | 870841..872064 | + | 1224 | WP_006250046.1 | FtsH protease activity modulator HflK | - |
| CKG20_RS04390 () | 872067..872954 | + | 888 | WP_006250047.1 | protease modulator HflC | - |
| CKG20_RS04395 () | 873128..874426 | + | 1299 | WP_006250049.1 | adenylosuccinate synthase | - |
| CKG20_RS04405 () | 874805..875098 | - | 294 | WP_006250050.1 | hypothetical protein | - |
| CKG20_RS04410 () | 875242..875631 | + | 390 | WP_006247811.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CKG20_RS04415 () | 875603..875902 | + | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| CKG20_RS14205 () | 875911..876069 | - | 159 | WP_006247809.1 | hypothetical protein | - |
| CKG20_RS04420 () | 876079..876765 | - | 687 | WP_006247808.1 | hypothetical protein | - |
| CKG20_RS04425 () | 876876..877487 | - | 612 | WP_006253310.1 | hypothetical protein | - |
| CKG20_RS04430 () | 877536..878162 | - | 627 | WP_006247807.1 | tail assembly protein | - |
| CKG20_RS04440 () | 878384..879103 | - | 720 | WP_006247806.1 | preprotein translocase subunit YajC | - |
| CKG20_RS04445 () | 879093..879383 | - | 291 | Protein_831 | C40 family peptidase | - |
| CKG20_RS04450 () | 879361..880071 | - | 711 | WP_006253312.1 | tape measure protein | - |
| CKG20_RS04455 () | 880131..880394 | - | 264 | WP_006247805.1 | hypothetical protein | - |
| CKG20_RS04460 () | 880469..880738 | - | 270 | WP_006247804.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CKG20_RS04465 () | 880742..881008 | - | 267 | WP_006247803.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CKG20_RS04470 () | 881076..881306 | - | 231 | WP_006247802.1 | DUF4035 domain-containing protein | - |
| CKG20_RS04475 () | 881351..881752 | - | 402 | WP_006247801.1 | hypothetical protein | - |
| CKG20_RS04480 () | 881835..882476 | - | 642 | WP_006247800.1 | hypothetical protein | - |
| CKG20_RS04485 () | 882508..882903 | - | 396 | WP_006247799.1 | phage tail protein | - |
| CKG20_RS04490 () | 882928..883155 | - | 228 | Protein_840 | phage terminase large subunit family protein | - |
| CKG20_RS04495 () | 883305..883679 | + | 375 | WP_006247798.1 | hypothetical protein | - |
| CKG20_RS04500 () | 883687..883854 | + | 168 | WP_006253314.1 | DNA cytosine methyltransferase | - |
| CKG20_RS04505 () | 883935..884258 | + | 324 | WP_006253316.1 | helix-turn-helix domain-containing protein | - |
| CKG20_RS04510 () | 884162..884872 | + | 711 | Protein_844 | tyrosine-type recombinase/integrase | - |
| CKG20_RS04515 () | 884973..885608 | + | 636 | Protein_845 | transposase | - |
| CKG20_RS04520 () | 885537..886241 | - | 705 | Protein_846 | DUF968 domain-containing protein | - |
| CKG20_RS04525 () | 886368..886961 | - | 594 | WP_006247795.1 | N-6-adenine methyltransferase | - |
| CKG20_RS04530 () | 886972..888018 | - | 1047 | WP_006247794.1 | conserved phage C-terminal domain-containing protein | - |
| CKG20_RS04535 () | 888015..888698 | - | 684 | WP_006247793.1 | phage regulatory protein/antirepressor Ant | - |
| CKG20_RS04540 () | 888756..888944 | - | 189 | WP_006247792.1 | Cro/Cl family transcriptional regulator | - |
| CKG20_RS04545 () | 889069..889725 | + | 657 | WP_006247791.1 | helix-turn-helix domain-containing protein | - |
| CKG20_RS04550 () | 889737..890111 | + | 375 | WP_006247790.1 | hypothetical protein | - |
| CKG20_RS04555 () | 890263..891000 | + | 738 | WP_006247789.1 | Abi family protein | - |
| CKG20_RS04560 () | 891036..891632 | - | 597 | WP_006253352.1 | hypothetical protein | - |
| CKG20_RS04565 () | 892278..892463 | + | 186 | WP_006249220.1 | hypothetical protein | - |
| CKG20_RS04570 () | 892447..892644 | + | 198 | WP_006249219.1 | hypothetical protein | - |
| CKG20_RS04575 () | 892647..893621 | + | 975 | WP_006249218.1 | single-stranded DNA-binding protein | - |
| CKG20_RS04590 () | 894055..894915 | + | 861 | WP_006249216.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| CKG20_RS04595 () | 895029..896480 | + | 1452 | WP_006249215.1 | tRNA 4-thiouridine(8) synthase ThiI | - |
| CKG20_RS04600 () | 896525..897232 | - | 708 | WP_006249214.1 | YwiC-like family protein | - |
| CKG20_RS04605 () | 897300..898274 | - | 975 | WP_006251855.1 | 6-phosphofructokinase | - |
| CKG20_RS04610 () | 898381..899577 | - | 1197 | WP_006249213.1 | cysteine desulfurase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|