MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 155305 bp
Accession: NZ_CP023046 Location: 1897089..2052393 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-187 Replicon: chromosome
Accession: NZ_CP023046 Location: 1897089..2052393 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKG21_RS09830 () | 1892303..1892911 | - | 609 | WP_006249296.1 | DUF2057 family protein | - |
| CKG21_RS09835 () | 1893049..1893948 | + | 900 | WP_006249295.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| CKG21_RS09840 () | 1894007..1895515 | + | 1509 | WP_006249294.1 | apolipoprotein N-acyltransferase | - |
| CKG21_RS09845 () | 1895561..1896025 | - | 465 | WP_006249293.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| CKG21_RS09850 () | 1896231..1897430 | - | 1200 | WP_006249292.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| CKG21_RS09855 () | 1897449..1898096 | - | 648 | WP_006249291.1 | riboflavin synthase | - |
| CKG21_RS09860 () | 1898313..1899410 | - | 1098 | WP_031192886.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| CKG21_RS09865 () | 1899908..1902310 | + | 2403 | WP_006249288.1 | endopeptidase La | - |
| CKG21_RS09870 () | 1902444..1903334 | - | 891 | WP_006249287.1 | HTH-type transcriptional activator IlvY | - |
| CKG21_RS09875 () | 1903336..1904367 | - | 1032 | WP_006249286.1 | glycosyltransferase family 9 protein | - |
| CKG21_RS09880 () | 1904415..1905470 | + | 1056 | WP_006249285.1 | glycosyltransferase family 9 protein | - |
| CKG21_RS09885 () | 1905525..1905737 | - | 213 | WP_006249284.1 | 50S ribosomal protein L31 | - |
| CKG21_RS09890 () | 1906100..1908106 | + | 2007 | WP_006249282.1 | transketolase | - |
| CKG21_RS09895 () | 1908232..1909302 | - | 1071 | WP_006249280.1 | PhoH family protein | - |
| CKG21_RS09900 () | 1909317..1910042 | - | 726 | WP_006249279.1 | fatty acid metabolism transcriptional regulator FadR | - |
| CKG21_RS09905 () | 1910199..1911739 | + | 1541 | Protein_1927 | sodium/proton antiporter NhaB | - |
| CKG21_RS09910 () | 1911802..1912341 | + | 540 | WP_006249277.1 | disulfide bond formation protein DsbB | - |
| CKG21_RS09915 () | 1912400..1913590 | + | 1191 | WP_006249276.1 | cystathionine beta-lyase | - |
| CKG21_RS09920 () | 1913655..1914744 | - | 1090 | Protein_1930 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| CKG21_RS09925 () | 1914918..1915559 | - | 642 | WP_006249274.1 | orotate phosphoribosyltransferase | - |
| CKG21_RS09930 () | 1915682..1916524 | - | 843 | WP_006249273.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| CKG21_RS09935 () | 1916584..1917159 | + | 576 | WP_006249272.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| CKG21_RS09940 () | 1917137..1917805 | - | 669 | WP_006249271.1 | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | - |
| CKG21_RS09945 () | 1917817..1918059 | - | 243 | WP_006249270.1 | CopG family transcriptional regulator | Antitoxin Detail |
| CKG21_RS09950 () | 1918043..1918339 | - | 297 | WP_006249269.1 | BrnT family toxin | Toxin Detail |
| CKG21_RS09955 () | 1918466..1921378 | - | 2913 | WP_006249267.1 | RNA polymerase-associated protein RapA | - |
| CKG21_RS09960 () | 1921539..1921838 | - | 300 | WP_006249265.1 | hypothetical protein | - |
| CKG21_RS09965 () | 1921959..1923284 | - | 1326 | WP_006249264.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| CKG21_RS09970 () | 1923369..1924688 | + | 1320 | WP_061888704.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| CKG21_RS09975 () | 1924828..1926009 | - | 1182 | WP_006249262.1 | Bcr/CflA family multidrug efflux MFS transporter | - |
| CKG21_RS09980 () | 1925999..1926700 | - | 702 | WP_006249261.1 | 16S rRNA pseudouridine(516) synthase RsuA | - |
| CKG21_RS09985 () | 1926945..1927916 | - | 972 | WP_006249260.1 | o-succinylbenzoate synthase | - |
| CKG21_RS09990 () | 1928128..1930206 | + | 2079 | WP_006249259.1 | methionine--tRNA ligase | - |
| CKG21_RS09995 () | 1930216..1930632 | + | 417 | WP_006249258.1 | nucleoside-diphosphate kinase | - |
| CKG21_RS10000 () | 1930688..1931164 | - | 477 | WP_006249257.1 | transcription elongation factor GreA | - |
| CKG21_RS10005 () | 1931261..1932706 | + | 1446 | WP_006249256.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| CKG21_RS10010 () | 1932793..1933062 | - | 270 | WP_006249255.1 | N-acetyltransferase | - |
| CKG21_RS10015 () | 1933234..1934823 | + | 1590 | WP_006249253.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| CKG21_RS10020 () | 1934878..1936254 | - | 1377 | WP_006249252.1 | L-serine ammonia-lyase | - |
| CKG21_RS10025 () | 1936311..1937537 | - | 1227 | WP_006249251.1 | HAAAP family serine/threonine permease | - |
| CKG21_RS10030 () | 1937807..1938694 | - | 888 | WP_006249250.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CKG21_RS10035 () | 1938790..1939731 | - | 942 | WP_006249249.1 | Lipid A biosynthesis lauroyltransferase | VF |
| CKG21_RS10040 () | 1939911..1940195 | + | 285 | WP_006253705.1 | ribosome-associated translation inhibitor RaiA | - |
| CKG21_RS10045 () | 1940371..1940493 | - | 123 | WP_006253706.1 | entericidin A/B family lipoprotein | - |
| CKG21_RS10050 () | 1940573..1941550 | - | 978 | WP_006250557.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| CKG21_RS10055 () | 1941691..1942470 | + | 780 | WP_006249247.1 | outer membrane protein assembly factor BamD | - |
| CKG21_RS10060 () | 1942543..1943574 | + | 1032 | WP_006249246.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CKG21_RS10065 () | 1943656..1944447 | + | 792 | WP_015587013.1 | Lipooligosaccharide biosynthesis protein lex-1 | VF |
| CKG21_RS10070 () | 1944458..1944763 | + | 306 | WP_006249244.1 | iron donor protein CyaY | - |
| CKG21_RS10075 () | 1944872..1946671 | + | 1800 | WP_006249243.1 | DNA helicase RecQ | - |
| CKG21_RS10080 () | 1946830..1947372 | + | 543 | WP_075270716.1 | translation initiation factor IF-3 | - |
| CKG21_RS10085 () | 1947636..1947833 | + | 198 | WP_006249241.1 | 50S ribosomal protein L35 | - |
| CKG21_RS10090 () | 1947942..1948295 | + | 354 | WP_006249240.1 | 50S ribosomal protein L20 | - |
| CKG21_RS10095 () | 1948420..1948695 | + | 276 | WP_006249239.1 | hypothetical protein | - |
| CKG21_RS10100 () | 1948700..1950538 | - | 1839 | WP_006249237.1 | excinuclease ABC subunit UvrC | - |
| CKG21_RS10105 () | 1950616..1951164 | - | 549 | WP_006253707.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| CKG21_RS10110 () | 1951370..1952035 | + | 666 | WP_006253076.1 | BAX inhibitor protein | - |
| CKG21_RS10115 () | 1952064..1952414 | + | 351 | WP_006250062.1 | TusE/DsrC/DsvC family sulfur relay protein | - |
| CKG21_RS10120 () | 1952548..1954395 | - | 1848 | WP_006253708.1 | dihydroxy-acid dehydratase | - |
| CKG21_RS10125 () | 1954596..1956089 | + | 1494 | WP_006253709.1 | PTS transporter subunit EIIC | - |
| CKG21_RS10130 () | 1956181..1957362 | - | 1182 | WP_006249956.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CKG21_RS10135 () | 1957497..1958135 | - | 639 | WP_005719747.1 | YkgB family protein | - |
| CKG21_RS10140 () | 1958195..1958548 | - | 354 | WP_006249955.1 | rhodanese-like domain-containing protein | - |
| CKG21_RS10145 () | 1958559..1958900 | - | 342 | WP_006249954.1 | carboxymuconolactone decarboxylase family protein | - |
| CKG21_RS10150 () | 1959036..1959932 | + | 897 | WP_006249953.1 | RCS-specific HTH-type transcriptional activator RclR | VF |
| CKG21_RS10155 () | 1960130..1960693 | + | 564 | WP_006249952.1 | GPR1/FUN34/YaaH family transporter | - |
| CKG21_RS10160 () | 1960798..1963233 | - | 2436 | WP_006249951.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| CKG21_RS10165 () | 1963400..1964035 | + | 636 | WP_006250537.1 | transcriptional repressor LexA | - |
| CKG21_RS10170 () | 1964127..1964807 | + | 681 | WP_006249385.1 | DNA mismatch repair endonuclease MutH | - |
| CKG21_RS10175 () | 1964896..1965627 | + | 732 | WP_006250611.1 | TerC family protein | - |
| CKG21_RS10180 () | 1965753..1966790 | + | 1038 | WP_006249149.1 | beta-N-acetylhexosaminidase | - |
| CKG21_RS10185 () | 1966783..1967961 | + | 1179 | WP_006253710.1 | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | - |
| CKG21_RS10190 () | 1968152..1969462 | + | 1311 | WP_006251191.1 | phosphopyruvate hydratase | - |
| CKG21_RS10195 () | 1969528..1969938 | + | 411 | WP_006248783.1 | DUF2251 domain-containing protein | - |
| CKG21_RS10200 () | 1969979..1970965 | - | 987 | WP_006248782.1 | dihydroorotate dehydrogenase | - |
| CKG21_RS10205 () | 1971032..1972264 | - | 1233 | WP_095586250.1 | uracil-xanthine permease family protein | - |
| CKG21_RS10210 () | 1972527..1973735 | - | 1209 | WP_006251194.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| CKG21_RS10215 () | 1973725..1974198 | - | 474 | WP_006248779.1 | NUDIX hydrolase | - |
| CKG21_RS10220 () | 1974198..1975238 | - | 1041 | WP_080542692.1 | selenide, water dikinase SelD | - |
| CKG21_RS10225 () | 1975388..1975570 | + | 183 | WP_006253059.1 | hypothetical protein | - |
| CKG21_RS10230 () | 1975795..1976835 | - | 1041 | WP_015587011.1 | IS481 family transposase ISShes15 | Transposase |
| CKG21_RS10235 () | 1976872..1977096 | - | 225 | WP_006253667.1 | NAD-dependent deacetylase | - |
| CKG21_RS10240 () | 1977263..1977904 | - | 642 | WP_006251045.1 | protein phosphatase 2C domain-containing protein | - |
| CKG21_RS10245 () | 1978205..1979113 | - | 909 | WP_006248775.1 | WYL domain-containing protein | - |
| CKG21_RS10255 () | 1979369..1980467 | + | 1099 | WP_096000823.1 | peptide chain release factor 2 | - |
| CKG21_RS10260 () | 1980570..1981550 | + | 981 | WP_006248774.1 | AEC family transporter | - |
| CKG21_RS10265 () | 1981572..1982657 | + | 1086 | WP_006248773.1 | metallophosphoesterase | - |
| CKG21_RS10270 () | 1982743..1983594 | - | 852 | WP_006251039.1 | DUF817 domain-containing protein | - |
| CKG21_RS10280 () | 1983807..1984853 | + | 1047 | WP_006251038.1 | galactose-1-phosphate uridylyltransferase | - |
| CKG21_RS10285 () | 1984863..1986026 | + | 1164 | WP_006249146.1 | galactokinase | - |
| CKG21_RS10290 () | 1986152..1987120 | + | 969 | WP_006249145.1 | galactose-1-epimerase | - |
| CKG21_RS10295 () | 1987161..1987718 | - | 558 | WP_006249144.1 | YtfJ family protein | - |
| CKG21_RS10300 () | 1987919..1988212 | + | 294 | WP_006249142.1 | preprotein translocase subunit YajC | - |
| CKG21_RS10305 () | 1988252..1990093 | + | 1842 | WP_006249141.1 | protein translocase subunit SecD | - |
| CKG21_RS10310 () | 1990103..1991077 | + | 975 | WP_006249140.1 | protein translocase subunit SecF | - |
| CKG21_RS10315 () | 1991210..1992511 | + | 1302 | WP_006249139.1 | NCS2 family permease | - |
| CKG21_RS10320 () | 1992632..1992934 | - | 303 | WP_006252515.1 | AzlD domain-containing protein | - |
| CKG21_RS10325 () | 1992945..1993643 | - | 699 | WP_006249137.1 | AzlC family ABC transporter permease | - |
| CKG21_RS10330 () | 1993865..1994902 | + | 1038 | WP_006249136.1 | ABC transporter substrate-binding protein | - |
| CKG21_RS10335 () | 1994989..1996269 | - | 1281 | WP_006249135.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CKG21_RS10340 () | 1996374..1996868 | - | 495 | WP_006249134.1 | SprT family zinc-dependent metalloprotease | - |
| CKG21_RS10345 () | 1996868..1997581 | - | 714 | WP_006249133.1 | ribonuclease | - |
| CKG21_RS10350 () | 1997671..1997988 | - | 318 | WP_006249132.1 | TfoX/Sxy family protein | - |
| CKG21_RS10355 () | 1998048..1998890 | + | 843 | WP_006249131.1 | hypothetical protein | VF |
| CKG21_RS10360 () | 1999073..2000224 | + | 1152 | WP_006249130.1 | methionine adenosyltransferase | - |
| CKG21_RS10365 () | 2000269..2001060 | - | 792 | WP_006249129.1 | D-methionine-binding lipoprotein MetQ | VF |
| CKG21_RS10370 () | 2001112..2001942 | - | 831 | WP_006249128.1 | putative D-methionine-binding lipoprotein MetQ | VF |
| CKG21_RS10375 () | 2002025..2002858 | - | 834 | WP_006249127.1 | putative D-methionine-binding lipoprotein MetQ | VF |
| CKG21_RS10380 () | 2002881..2003558 | - | 678 | WP_006249126.1 | ABC transporter permease | - |
| CKG21_RS10385 () | 2003548..2004582 | - | 1035 | WP_006249125.1 | Methionine import ATP-binding protein MetN | VF |
| CKG21_RS10390 () | 2004805..2006352 | - | 1548 | WP_006249124.1 | ATP-dependent endonuclease | - |
| CKG21_RS10395 () | 2006372..2007739 | - | 1368 | WP_006249123.1 | LOG family protein | - |
| CKG21_RS10400 () | 2007786..2008544 | - | 759 | WP_006249122.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| CKG21_RS10405 () | 2008626..2010590 | - | 1965 | WP_006249121.1 | ABC transporter ATP-binding protein | - |
| CKG21_RS10410 () | 2010685..2013381 | - | 2697 | WP_006249120.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| CKG21_RS10415 () | 2013478..2013858 | - | 381 | WP_006249118.1 | pyrimidine dimer DNA glycosylase/endonuclease V | - |
| CKG21_RS10420 () | 2013923..2014636 | + | 714 | WP_006249117.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| CKG21_RS10425 () | 2014699..2015637 | + | 939 | WP_006249116.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CKG21_RS10430 () | 2015621..2016268 | - | 648 | WP_006249115.1 | Tetrathionate response regulatory protein TtrR | VF |
| CKG21_RS10435 () | 2016354..2018012 | - | 1659 | WP_006249114.1 | PhnD/SsuA/transferrin family substrate-binding protein | - |
| CKG21_RS10440 () | 2018012..2018428 | - | 417 | WP_006249113.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| CKG21_RS10445 () | 2018418..2018714 | - | 297 | WP_006249112.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| CKG21_RS10450 () | 2019070..2020786 | + | 1717 | Protein_2034 | hypothetical protein | - |
| CKG21_RS10460 () | 2021151..2021879 | + | 729 | WP_006249109.1 | tetrathionate reductase subunit TtrB | - |
| CKG21_RS10465 () | 2021881..2022912 | + | 1032 | WP_006249108.1 | polysulfide reductase NrfD | - |
| CKG21_RS10470 () | 2022902..2025997 | + | 3096 | WP_006249107.1 | tetrathionate reductase subunit TtrA | - |
| CKG21_RS10475 () | 2026138..2026983 | + | 846 | WP_006249106.1 | MBL fold metallo-hydrolase | - |
| CKG21_RS10480 () | 2027096..2028493 | - | 1398 | WP_006249104.1 | TolC family protein | - |
| CKG21_RS10485 () | 2028583..2029206 | - | 624 | WP_006249103.1 | guanylate kinase | - |
| CKG21_RS10490 () | 2029319..2029792 | - | 474 | WP_006251004.1 | xanthine phosphoribosyltransferase | - |
| CKG21_RS10495 () | 2029938..2031347 | - | 1410 | WP_006249102.1 | DUF560 domain-containing protein | - |
| CKG21_RS10500 () | 2031543..2032763 | - | 1221 | WP_006249101.1 | hypothetical protein | VF |
| CKG21_RS10505 () | 2032966..2034420 | + | 1455 | WP_006249099.1 | aminoacyl-histidine dipeptidase | - |
| CKG21_RS10510 () | 2034495..2035784 | - | 1290 | WP_006249098.1 | MFS transporter | - |
| CKG21_RS10515 () | 2035988..2036323 | - | 336 | WP_006249096.1 | RnfH family protein | - |
| CKG21_RS10520 () | 2036313..2036747 | - | 435 | WP_006249095.1 | type II toxin-antitoxin system RatA family toxin | - |
| CKG21_RS10525 () | 2036802..2037857 | - | 1056 | WP_006249094.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| CKG21_RS10530 () | 2037844..2038536 | - | 693 | WP_006249093.1 | molybdate ABC transporter permease subunit | - |
| CKG21_RS10535 () | 2038720..2039475 | - | 756 | WP_006249092.1 | molybdate ABC transporter substrate-binding protein | - |
| CKG21_RS10540 () | 2039496..2040257 | - | 762 | WP_006249091.1 | ABC transporter permease | - |
| CKG21_RS10545 () | 2040259..2041167 | - | 909 | WP_006249090.1 | putative ABC transporter ATP-binding protein YadG | VF |
| CKG21_RS10550 () | 2041173..2043230 | - | 2058 | WP_006249089.1 | DNA polymerase III subunit gamma/tau | - |
| CKG21_RS10555 () | 2043321..2043860 | - | 540 | WP_006249088.1 | adenine phosphoribosyltransferase | - |
| CKG21_RS10560 () | 2043988..2044938 | - | 951 | WP_006249087.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CKG21_RS10570 () | 2045379..2046062 | - | 684 | WP_006249085.1 | electron transport complex subunit E | - |
| CKG21_RS10575 () | 2046071..2046703 | - | 633 | WP_006249084.1 | electron transport complex subunit RsxG | - |
| CKG21_RS10580 () | 2046703..2047758 | - | 1056 | WP_006249083.1 | electron transport complex subunit RsxD | - |
| CKG21_RS10585 () | 2047804..2048439 | - | 636 | WP_006249082.1 | trimeric intracellular cation channel family protein | - |
| CKG21_RS10590 () | 2048432..2050726 | - | 2295 | WP_006249081.1 | electron transport complex subunit RsxC | - |
| CKG21_RS10595 () | 2050713..2051330 | - | 618 | WP_006249080.1 | electron transport complex subunit RsxB | - |
| CKG21_RS10600 () | 2051330..2051911 | - | 582 | WP_006249079.1 | electron transport complex subunit RsxA | - |
| CKG21_RS10605 () | 2052226..2052711 | - | 486 | WP_006249078.1 | hypothetical protein | - |
| CKG21_RS10610 () | 2052739..2053110 | - | 372 | WP_020824383.1 | hypothetical protein | - |
| CKG21_RS10615 () | 2053128..2054297 | - | 1170 | WP_006249076.1 | hypothetical protein | - |
| CKG21_RS10620 () | 2054307..2054786 | - | 480 | WP_006249075.1 | hypothetical protein | - |
| CKG21_RS10625 () | 2054992..2056662 | + | 1671 | WP_006249074.1 | energy-dependent translational throttle protein EttA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|