MGE detailed information
MGE type: Prophage MGE length: 63107 bp
Accession: NZ_CP023046 Location: 1684403..1747509 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-187 Replicon: chromosome
Accession: NZ_CP023046 Location: 1684403..1747509 Organism: Mannheimia haemolytica strain USDA-ARS-USMARC-187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKG21_RS08625 () | 1679741..1680937 | + | 1197 | WP_006249213.1 | cysteine desulfurase | - |
| CKG21_RS08630 () | 1681044..1682018 | + | 975 | WP_006251855.1 | 6-phosphofructokinase | - |
| CKG21_RS08635 () | 1682086..1682793 | + | 708 | WP_006249214.1 | YwiC-like family protein | - |
| CKG21_RS08640 () | 1682838..1684289 | - | 1452 | WP_006249215.1 | tRNA 4-thiouridine(8) synthase ThiI | - |
| CKG21_RS08645 () | 1684403..1685263 | - | 861 | WP_006249216.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| CKG21_RS08660 () | 1685697..1686671 | - | 975 | WP_006249218.1 | Single-stranded DNA-binding protein ; Integrase | Integrase |
| CKG21_RS08665 () | 1686674..1686871 | - | 198 | WP_006249219.1 | hypothetical protein | - |
| CKG21_RS08670 () | 1686855..1687040 | - | 186 | WP_006249220.1 | hypothetical protein | - |
| CKG21_RS08675 () | 1687686..1688282 | + | 597 | WP_006253352.1 | hypothetical protein | - |
| CKG21_RS08680 () | 1688318..1689055 | - | 738 | WP_006247789.1 | Abi family protein | - |
| CKG21_RS08685 () | 1689207..1689581 | - | 375 | WP_006247790.1 | hypothetical protein | - |
| CKG21_RS08690 () | 1689593..1690249 | - | 657 | WP_006247791.1 | helix-turn-helix domain-containing protein | - |
| CKG21_RS08695 () | 1690374..1690562 | + | 189 | WP_006247792.1 | Cro/Cl family transcriptional regulator | - |
| CKG21_RS08700 () | 1690620..1691303 | + | 684 | WP_006247793.1 | phage regulatory protein/antirepressor Ant | - |
| CKG21_RS08705 () | 1691300..1692346 | + | 1047 | WP_006247794.1 | conserved phage C-terminal domain-containing protein | - |
| CKG21_RS08710 () | 1692357..1692950 | + | 594 | WP_006247795.1 | N-6-adenine methyltransferase | - |
| CKG21_RS08715 () | 1693077..1693781 | + | 705 | Protein_1677 | DUF968 domain-containing protein | - |
| CKG21_RS08720 () | 1693710..1694345 | - | 636 | Protein_1678 | IS481 family transposase ISVvu4 | Transposase |
| CKG21_RS08725 () | 1694446..1695156 | - | 711 | Protein_1679 | hypothetical protein ; Integrase | Integrase |
| CKG21_RS08730 () | 1695060..1695383 | - | 324 | WP_095586246.1 | helix-turn-helix domain-containing protein | - |
| CKG21_RS08735 () | 1695464..1695631 | - | 168 | WP_006253314.1 | DNA cytosine methyltransferase | - |
| CKG21_RS08740 () | 1695639..1696013 | - | 375 | WP_006247798.1 | hypothetical protein | - |
| CKG21_RS08745 () | 1696163..1696390 | + | 228 | Protein_1683 | phage terminase large subunit family protein | - |
| CKG21_RS08750 () | 1696415..1696810 | + | 396 | WP_006247799.1 | phage tail protein | - |
| CKG21_RS08755 () | 1696842..1697483 | + | 642 | WP_006247800.1 | hypothetical protein | - |
| CKG21_RS08760 () | 1697566..1697967 | + | 402 | WP_006247801.1 | hypothetical protein | - |
| CKG21_RS08765 () | 1698012..1698242 | + | 231 | WP_006247802.1 | DUF4035 domain-containing protein | - |
| CKG21_RS08770 () | 1698310..1698576 | + | 267 | WP_006247803.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CKG21_RS08775 () | 1698580..1698849 | + | 270 | WP_006247804.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CKG21_RS08780 () | 1698924..1699187 | + | 264 | WP_006247805.1 | hypothetical protein | - |
| CKG21_RS08785 () | 1699247..1699957 | + | 711 | WP_006253312.1 | tape measure protein | - |
| CKG21_RS08790 () | 1699935..1700225 | + | 291 | Protein_1692 | C40 family peptidase | - |
| CKG21_RS08795 () | 1700215..1700934 | + | 720 | WP_006247806.1 | preprotein translocase subunit YajC | - |
| CKG21_RS08805 () | 1701156..1701782 | + | 627 | WP_006247807.1 | tail assembly protein | - |
| CKG21_RS08810 () | 1701831..1702442 | + | 612 | WP_006253310.1 | hypothetical protein | - |
| CKG21_RS08815 () | 1702553..1703239 | + | 687 | WP_006247808.1 | hypothetical protein | - |
| CKG21_RS14210 () | 1703249..1703407 | + | 159 | WP_006247809.1 | hypothetical protein | - |
| CKG21_RS08820 () | 1703416..1703715 | - | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| CKG21_RS08825 () | 1703687..1704076 | - | 390 | WP_006247811.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CKG21_RS08830 () | 1704220..1704513 | + | 294 | WP_006250050.1 | hypothetical protein | - |
| CKG21_RS08840 () | 1704892..1706190 | - | 1299 | WP_006250049.1 | adenylosuccinate synthase | - |
| CKG21_RS08845 () | 1706364..1707251 | - | 888 | WP_006250047.1 | protease modulator HflC | - |
| CKG21_RS08850 () | 1707254..1708476 | - | 1223 | Protein_1703 | FtsH protease activity modulator HflK | - |
| CKG21_RS08855 () | 1708647..1708976 | - | 330 | WP_006250045.1 | thioredoxin | - |
| CKG21_RS08860 () | 1709231..1709902 | - | 672 | WP_006253592.1 | outer membrane beta-barrel protein | - |
| CKG21_RS08865 () | 1710157..1712724 | + | 2568 | WP_006249856.1 | Chaperone protein ClpB | VF |
| CKG21_RS08870 () | 1712938..1714080 | + | 1143 | WP_006249857.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| CKG21_RS08875 () | 1714320..1715048 | - | 729 | WP_006248628.1 | helix-turn-helix transcriptional regulator | - |
| CKG21_RS08880 () | 1715258..1715485 | + | 228 | WP_006248629.1 | helix-turn-helix domain-containing protein | - |
| CKG21_RS08885 () | 1715500..1717437 | + | 1938 | WP_006248630.1 | hypothetical protein ; Integrase | Integrase |
| CKG21_RS08890 () | 1717441..1718322 | + | 882 | WP_006248631.1 | AAA family ATPase | - |
| CKG21_RS08895 () | 1718333..1718654 | + | 322 | Protein_1712 | hypothetical protein | - |
| CKG21_RS08900 () | 1718657..1718848 | + | 192 | WP_006248633.1 | hypothetical protein | - |
| CKG21_RS08905 () | 1718861..1719478 | + | 618 | WP_006248634.1 | DUF3164 family protein | - |
| CKG21_RS08910 () | 1719480..1719686 | + | 207 | WP_006248635.1 | hypothetical protein | - |
| CKG21_RS14215 () | 1719797..1719943 | + | 147 | WP_006248636.1 | ANR family transcriptional regulator | - |
| CKG21_RS08915 () | 1720010..1720192 | + | 183 | WP_006248637.1 | hypothetical protein | - |
| CKG21_RS08920 () | 1720215..1720790 | + | 576 | WP_006248638.1 | DUF5420 family protein | - |
| CKG21_RS14360 () | 1720861..1721031 | + | 171 | WP_006248639.1 | hypothetical protein | - |
| CKG21_RS08925 () | 1721031..1721585 | + | 555 | WP_006248640.1 | hypothetical protein | - |
| CKG21_RS08930 () | 1721569..1721994 | + | 426 | WP_006248641.1 | regulatory protein GemA | - |
| CKG21_RS08935 () | 1722083..1722478 | + | 396 | WP_095586247.1 | hypothetical protein | - |
| CKG21_RS08940 () | 1722555..1722947 | + | 393 | WP_006248643.1 | hypothetical protein | - |
| CKG21_RS08945 () | 1722966..1723181 | + | 216 | WP_006248644.1 | transcriptional regulator | - |
| CKG21_RS08950 () | 1723252..1723677 | + | 426 | WP_006248645.1 | hypothetical protein | - |
| CKG21_RS08955 () | 1723763..1724296 | + | 534 | WP_006248646.1 | glycoside hydrolase family 108 protein | - |
| CKG21_RS08960 () | 1724299..1724544 | + | 246 | WP_006248647.1 | DUF2644 domain-containing protein | - |
| CKG21_RS08965 () | 1724541..1724900 | + | 360 | WP_006248648.1 | DUF2681 domain-containing protein | - |
| CKG21_RS14365 () | 1724915..1725070 | + | 156 | WP_006248649.1 | hypothetical protein | - |
| CKG21_RS08970 () | 1725063..1725320 | + | 258 | WP_005606396.1 | hypothetical protein | - |
| CKG21_RS08975 () | 1725320..1725574 | + | 255 | WP_005606393.1 | hypothetical protein | - |
| CKG21_RS08980 () | 1725582..1726082 | + | 501 | WP_006248650.1 | DUF1804 family protein | - |
| CKG21_RS14370 () | 1726082..1726228 | + | 147 | WP_006248651.1 | hypothetical protein | - |
| CKG21_RS08985 () | 1726232..1727857 | + | 1626 | WP_006248652.1 | phage terminase large subunit | - |
| CKG21_RS08990 () | 1727926..1729550 | + | 1625 | Protein_1735 | DUF935 domain-containing protein | - |
| CKG21_RS08995 () | 1729537..1730841 | + | 1305 | WP_006248654.1 | minor capsid protein | - |
| CKG21_RS09000 () | 1730992..1731408 | + | 417 | WP_006248655.1 | phage virion morphogenesis protein | - |
| CKG21_RS09005 () | 1731665..1732732 | + | 1068 | Protein_1738 | phage protease | - |
| CKG21_RS09010 () | 1732732..1733647 | + | 916 | Protein_1739 | Mu-like prophage major head subunit gpT family protein | - |
| CKG21_RS09015 () | 1733695..1734035 | + | 341 | Protein_1740 | hypothetical protein | - |
| CKG21_RS09020 () | 1734035..1734460 | + | 426 | WP_006248659.1 | DUF1320 domain-containing protein | - |
| CKG21_RS09025 () | 1734457..1735098 | + | 642 | WP_006248660.1 | DUF1834 family protein | - |
| CKG21_RS09030 () | 1735099..1735278 | + | 180 | WP_006248661.1 | DUF2635 domain-containing protein | - |
| CKG21_RS09035 () | 1735278..1736687 | + | 1410 | WP_015587105.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CKG21_RS09040 () | 1736698..1737072 | + | 375 | WP_006253444.1 | hypothetical protein | - |
| CKG21_RS09045 () | 1737072..1737440 | + | 369 | WP_006253443.1 | hypothetical protein | - |
| CKG21_RS09050 () | 1737470..1737658 | + | 189 | WP_006251296.1 | hypothetical protein | - |
| CKG21_RS09055 () | 1737711..1739990 | + | 2280 | WP_015587106.1 | phage tail tape measure protein | - |
| CKG21_RS09060 () | 1739990..1741282 | + | 1293 | WP_006248664.1 | DNA circularization protein | - |
| CKG21_RS09065 () | 1741285..1742412 | + | 1128 | WP_006248665.1 | hypothetical protein | - |
| CKG21_RS09070 () | 1742414..1743076 | + | 663 | WP_006248666.1 | phage baseplate assembly protein V | - |
| CKG21_RS09075 () | 1743195..1743545 | + | 351 | WP_006248668.1 | phage GP46 family protein | - |
| CKG21_RS09080 () | 1743558..1744619 | + | 1062 | WP_006248669.1 | baseplate J/gp47 family protein | - |
| CKG21_RS09085 () | 1744619..1745209 | + | 591 | WP_006248670.1 | DUF2313 domain-containing protein | - |
| CKG21_RS09090 () | 1745206..1747266 | + | 2061 | WP_095586233.1 | phage tail protein | - |
| CKG21_RS09095 () | 1747267..1747509 | + | 243 | WP_006248673.1 | hypothetical protein | - |
| CKG21_RS09100 () | 1747496..1747726 | + | 231 | WP_095586248.1 | hypothetical protein | - |
| CKG21_RS09105 () | 1747831..1748064 | - | 234 | Protein_1758 | TDT family transporter | - |
| CKG21_RS09110 () | 1748193..1748387 | - | 195 | WP_006248391.1 | Fe-S cluster assembly protein IscX | - |
| CKG21_RS09115 () | 1748387..1748728 | - | 342 | WP_006248390.1 | ISC system 2Fe-2S type ferredoxin | - |
| CKG21_RS09120 () | 1748747..1749112 | - | 366 | WP_006248389.1 | immunity 51 family protein | - |
| CKG21_RS09125 () | 1749122..1750975 | - | 1854 | WP_006248388.1 | Fe-S protein assembly chaperone HscA | - |
| CKG21_RS09130 () | 1751291..1751632 | - | 342 | WP_006253362.1 | endonuclease domain-containing protein | - |
| CKG21_RS09135 () | 1751780..1752412 | - | 633 | WP_006248387.1 | DUF2625 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|