MGE detailed information
MGE type: Prophage MGE length: 49269 bp
Accession: NZ_CP023019 Location: 3247952..3297220 Organism: Shewanella sp. WE21 Replicon: chromosome
Accession: NZ_CP023019 Location: 3247952..3297220 Organism: Shewanella sp. WE21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKQ84_RS14155 () | 3243542..3244465 | + | 924 | WP_105251762.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| CKQ84_RS14160 () | 3244582..3246219 | + | 1638 | WP_012587102.1 | CTP synthase | - |
| CKQ84_RS14165 () | 3246450..3247745 | + | 1296 | WP_105251763.1 | phosphopyruvate hydratase | - |
| CKQ84_RS14170 () | 3247862..3248182 | + | 321 | WP_105251764.1 | hypothetical protein | - |
| CKQ84_RS14175 () | 3248145..3249215 | - | 1071 | WP_105251765.1 | site-specific DNA-methyltransferase | - |
| CKQ84_RS14180 () | 3249443..3249811 | - | 369 | WP_105251766.1 | DUF1353 domain-containing protein | - |
| CKQ84_RS14185 () | 3249808..3250422 | - | 615 | WP_105251767.1 | hypothetical protein | - |
| CKQ84_RS14190 () | 3250425..3251075 | - | 651 | WP_105251768.1 | hypothetical protein | - |
| CKQ84_RS14195 () | 3251075..3251338 | - | 264 | WP_105251769.1 | hypothetical protein | - |
| CKQ84_RS14200 () | 3251338..3252366 | - | 1029 | WP_105251770.1 | phage portal protein | - |
| CKQ84_RS14205 () | 3252366..3254171 | - | 1806 | WP_105251771.1 | terminase family protein | - |
| CKQ84_RS14210 () | 3254284..3255336 | + | 1053 | WP_105251772.1 | GPO family capsid scaffolding protein | - |
| CKQ84_RS14215 () | 3255360..3256682 | + | 1323 | WP_105251773.1 | phage major capsid protein, P2 family | - |
| CKQ84_RS14220 () | 3256692..3257414 | + | 723 | WP_105251774.1 | hypothetical protein | - |
| CKQ84_RS14225 () | 3257505..3257966 | + | 462 | WP_158683054.1 | head completion/stabilization protein | - |
| CKQ84_RS14230 () | 3257963..3258463 | + | 501 | WP_158683056.1 | phage tail protein | - |
| CKQ84_RS14235 () | 3258453..3259106 | + | 654 | WP_105251777.1 | phage virion morphogenesis protein | - |
| CKQ84_RS14240 () | 3259110..3260267 | + | 1158 | WP_105251778.1 | DUF2586 family protein | - |
| CKQ84_RS14245 () | 3260282..3260746 | + | 465 | WP_105251779.1 | DUF2597 family protein | - |
| CKQ84_RS14250 () | 3260755..3261078 | + | 324 | WP_105251780.1 | hypothetical protein | - |
| CKQ84_RS14255 () | 3261088..3261513 | + | 426 | WP_105251781.1 | M15 family metallopeptidase | - |
| CKQ84_RS14260 () | 3261569..3261916 | + | 348 | WP_158683058.1 | hypothetical protein | - |
| CKQ84_RS23885 () | 3261925..3262101 | + | 177 | WP_173913191.1 | hypothetical protein | - |
| CKQ84_RS14265 () | 3262110..3262778 | + | 669 | WP_105251783.1 | hypothetical protein | - |
| CKQ84_RS14270 () | 3262775..3264820 | + | 2046 | WP_105251784.1 | phage tail tape measure protein | - |
| CKQ84_RS14275 () | 3264817..3265137 | + | 321 | WP_105251785.1 | DUF2590 family protein | - |
| CKQ84_RS14280 () | 3265128..3266315 | + | 1188 | WP_105251786.1 | baseplate J/gp47 family protein | - |
| CKQ84_RS14285 () | 3266312..3266899 | + | 588 | WP_105251787.1 | phage tail protein | - |
| CKQ84_RS14290 () | 3266921..3268714 | + | 1794 | WP_105251788.1 | phage tail protein | - |
| CKQ84_RS14295 () | 3268745..3269614 | + | 870 | WP_105251789.1 | hypothetical protein | - |
| CKQ84_RS14300 () | 3269611..3270189 | + | 579 | WP_105251790.1 | adenine glycosylase | - |
| CKQ84_RS14305 () | 3270190..3270870 | + | 681 | WP_105251791.1 | hypothetical protein | - |
| CKQ84_RS14310 () | 3270855..3271841 | + | 987 | WP_158683060.1 | hypothetical protein | - |
| CKQ84_RS14325 () | 3272628..3273287 | - | 660 | WP_105251794.1 | hypothetical protein | - |
| CKQ84_RS14330 () | 3273605..3274561 | + | 957 | WP_105251795.1 | IS110 family transposase ISSpi5 | Transposase |
| CKQ84_RS14335 () | 3276043..3276456 | - | 414 | WP_105251796.1 | hypothetical protein | Toxin Detail |
| CKQ84_RS14340 () | 3276453..3277016 | - | 564 | WP_105251797.1 | SocA family protein | Antitoxin Detail |
| CKQ84_RS14345 () | 3277245..3277481 | - | 237 | WP_105251798.1 | Magnesium transporter MgtE | VF |
| CKQ84_RS14350 () | 3277478..3279754 | - | 2277 | WP_105251799.1 | replication endonuclease | - |
| CKQ84_RS14360 () | 3280062..3280661 | - | 600 | WP_105251801.1 | 3'-5' exonuclease | - |
| CKQ84_RS14365 () | 3280658..3280915 | - | 258 | WP_105251802.1 | hypothetical protein | - |
| CKQ84_RS14370 () | 3280930..3281286 | - | 357 | WP_105251803.1 | hypothetical protein | - |
| CKQ84_RS23775 () | 3281333..3281506 | - | 174 | WP_158683062.1 | hypothetical protein | - |
| CKQ84_RS14375 () | 3281552..3281824 | - | 273 | WP_105251804.1 | hypothetical protein | - |
| CKQ84_RS14380 () | 3281930..3282217 | + | 288 | WP_105251805.1 | helix-turn-helix domain-containing protein | - |
| CKQ84_RS14385 () | 3282266..3283234 | + | 969 | WP_105251806.1 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC ; Integrase | Integrase |
| CKQ84_RS14390 () | 3283409..3283708 | + | 300 | WP_105253074.1 | cell division protein FtsB | - |
| CKQ84_RS14395 () | 3283721..3284512 | + | 792 | WP_173913192.1 | Methionine import ATP-binding protein MetN | VF |
| CKQ84_RS14400 () | 3284550..3285035 | + | 486 | WP_028761366.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| CKQ84_RS14405 () | 3285056..3286171 | + | 1116 | WP_105251807.1 | tRNA pseudouridine(13) synthase TruD | - |
| CKQ84_RS14410 () | 3286168..3286917 | + | 750 | WP_105251808.1 | 5'/3'-nucleotidase SurE | - |
| CKQ84_RS14415 () | 3286914..3287549 | + | 636 | WP_028761363.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| CKQ84_RS14420 () | 3287649..3288545 | + | 897 | WP_105251809.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| CKQ84_RS14425 () | 3288626..3289606 | + | 981 | WP_028761361.1 | RNA polymerase sigma factor RpoS | - |
| CKQ84_RS14430 () | 3289739..3292309 | - | 2571 | WP_105251810.1 | DNA mismatch repair protein MutS | - |
| CKQ84_RS14440 () | 3292712..3293779 | + | 1068 | WP_105251812.1 | recombinase RecA | - |
| CKQ84_RS14445 () | 3293854..3294276 | + | 423 | WP_105251813.1 | recombination regulator RecX | - |
| CKQ84_RS14450 () | 3294596..3297220 | + | 2625 | WP_105251814.1 | alanine--tRNA ligase | - |
| CKQ84_RS14455 () | 3297230..3298486 | + | 1257 | WP_105251815.1 | aspartate kinase | - |
| CKQ84_RS14460 () | 3298605..3298802 | + | 198 | WP_006082602.1 | carbon storage regulator CsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|