MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57820 bp
Accession: NZ_CP022912 Location: 871690..929509 Organism: Escherichia coli O6:H16 strain 2011EL-1370-2 Replicon: chromosome
Accession: NZ_CP022912 Location: 871690..929509 Organism: Escherichia coli O6:H16 strain 2011EL-1370-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJZ79_RS04630 () | 866820..867554 | - | 735 | Protein_844 | LptF/LptG family permease | - |
| CJZ79_RS04635 () | 867585..868145 | - | 561 | WP_001298770.1 | YtfJ family protein | - |
| CJZ79_RS04640 () | 868157..868981 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| CJZ79_RS04645 () | 868981..870330 | - | 1350 | WP_000896896.1 | lipopolysaccharide biosynthesis protein | - |
| CJZ79_RS04650 () | 870376..871134 | - | 759 | WP_000339531.1 | ATP-binding protein | - |
| CJZ79_RS04655 () | 871166..871553 | - | 388 | Protein_849 | ATP-binding protein | - |
| CJZ79_RS04665 () | 871741..872438 | + | 698 | Protein_850 | IS1 family transposase IS1R | Transposase |
| CJZ79_RS04670 () | 872455..872799 | + | 345 | Protein_851 | LptF/LptG family permease | - |
| CJZ79_RS04675 () | 872796..873875 | + | 1080 | WP_032328098.1 | LPS export ABC transporter permease LptG | - |
| CJZ79_RS04680 () | 873910..875082 | - | 1173 | WP_000524970.1 | 8-amino-7-oxononanoate synthase | VF |
| CJZ79_RS04685 () | 875082..875330 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| CJZ79_RS04690 () | 875362..876276 | - | 915 | WP_001077166.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CJZ79_RS04695 () | 876273..877994 | - | 1722 | WP_001373528.1 | Long-chain-fatty-acid--AMP ligase FadD26 | VF |
| CJZ79_RS04700 () | 878371..879513 | + | 1143 | WP_001300526.1 | DNA-binding protein | - |
| CJZ79_RS04705 () | 879520..880284 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CJZ79_RS04710 () | 880535..882034 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CJZ79_RS04715 () | 882034..883086 | + | 1053 | WP_000943087.1 | glycolate oxidase subunit GlcE | - |
| CJZ79_RS04720 () | 883097..884320 | + | 1224 | WP_001194653.1 | glycolate oxidase subunit GlcF | - |
| CJZ79_RS04725 () | 884325..884729 | + | 405 | WP_000853257.1 | heme-binding protein | - |
| CJZ79_RS04730 () | 884751..886922 | + | 2172 | WP_000084128.1 | malate synthase G | - |
| CJZ79_RS04735 () | 887277..888959 | + | 1683 | WP_000259283.1 | glycolate permease GlcA | - |
| CJZ79_RS04745 () | 889444..894009 | + | 4566 | WP_001034531.1 | hypothetical protein | VF |
| CJZ79_RS04755 () | 894139..894948 | + | 810 | WP_000895866.1 | Leader peptidase PppA | VF |
| CJZ79_RS04760 () | 895014..895424 | + | 411 | WP_001298257.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| CJZ79_RS04765 () | 895442..896401 | + | 960 | WP_000135087.1 | Type II secretion system protein C | VF |
| CJZ79_RS04770 () | 896431..898491 | + | 2061 | WP_001394831.1 | Type II secretion system protein D | VF |
| CJZ79_RS04775 () | 898491..899984 | + | 1494 | WP_000249375.1 | Type II secretion system protein E | VF |
| CJZ79_RS04780 () | 899984..901207 | + | 1224 | WP_001173427.1 | Type II secretion system protein F | VF |
| CJZ79_RS04785 () | 901224..901679 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| CJZ79_RS04790 () | 901683..902246 | + | 564 | WP_001115150.1 | Type II secretion system protein H | VF |
| CJZ79_RS04795 () | 902243..902614 | + | 372 | WP_047646124.1 | Type II secretion system protein I | VF |
| CJZ79_RS04800 () | 902611..903216 | + | 606 | WP_011579195.1 | Type II secretion system protein J | VF |
| CJZ79_RS04805 () | 903213..904190 | + | 978 | WP_000631647.1 | Putative type II secretion system protein K | VF |
| CJZ79_RS04810 () | 904187..905365 | + | 1179 | WP_000097217.1 | Type II secretion system protein L | VF |
| CJZ79_RS04815 () | 905367..905903 | + | 537 | WP_000942814.1 | Type II secretion system protein M | VF |
| CJZ79_RS04820 () | 906959..907735 | + | 777 | WP_000124278.1 | Polysialic acid transport protein KpsM | VF |
| CJZ79_RS04825 () | 907732..908400 | + | 669 | WP_000590263.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| CJZ79_RS04830 () | 909563..910453 | + | 891 | WP_000217288.1 | hypothetical protein | VF |
| CJZ79_RS04835 () | 910450..911439 | + | 990 | WP_000742566.1 | hypothetical protein | - |
| CJZ79_RS04840 () | 911439..912395 | + | 957 | WP_001393366.1 | hypothetical protein | - |
| CJZ79_RS04845 () | 912392..913030 | + | 639 | WP_000694922.1 | hypothetical protein | - |
| CJZ79_RS04855 () | 913319..914265 | + | 947 | Protein_885 | alpha/beta hydrolase | - |
| CJZ79_RS04860 () | 914619..916748 | + | 2130 | WP_004097426.1 | hypothetical protein | VF |
| CJZ79_RS04865 () | 916785..918035 | + | 1251 | WP_001023681.1 | hypothetical protein | VF |
| CJZ79_RS04870 () | 918190..919227 | - | 1038 | Protein_888 | IS630 family transposase ISEc40 | Transposase |
| CJZ79_RS04875 () | 919265..920713 | - | 1449 | WP_001355481.1 | hypothetical protein | VF |
| CJZ79_RS04880 () | 920710..921450 | - | 741 | WP_000030750.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CJZ79_RS04885 () | 921460..923136 | - | 1677 | WP_001305965.1 | Polysialic acid transport protein KpsD | VF |
| CJZ79_RS04890 () | 923160..924308 | - | 1149 | WP_000905925.1 | hypothetical protein | VF |
| CJZ79_RS04895 () | 924380..925363 | - | 984 | WP_001355482.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| CJZ79_RS04900 () | 926175..926345 | - | 171 | Protein_894 | IS110 family transposase | - |
| CJZ79_RS04905 () | 926688..927530 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| CJZ79_RS04910 () | 927615..927812 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| CJZ79_RS26460 () | 927888..928037 | - | 150 | Protein_897 | hypothetical protein | - |
| CJZ79_RS04915 () | 928034..928402 | - | 369 | WP_140159973.1 | TA system toxin CbtA family protein | Toxin Detail |
| CJZ79_RS04920 () | 928500..928868 | - | 369 | WP_001285580.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CJZ79_RS04925 () | 928947..929168 | - | 222 | WP_000691818.1 | DUF987 domain-containing protein | - |
| CJZ79_RS04935 () | 929305..929484 | - | 180 | WP_047646086.1 | hypothetical protein | - |
| CJZ79_RS04940 () | 929526..930223 | + | 698 | Protein_902 | IS1 family transposase | - |
| CJZ79_RS04950 () | 931032..931256 | + | 225 | WP_001395295.1 | transposase | - |
| CJZ79_RS04955 () | 931258..931389 | - | 132 | Protein_904 | IS3 family transposase | - |
| CJZ79_RS04960 () | 931421..932992 | - | 1572 | WP_000381401.1 | IS66 family transposase | - |
| CJZ79_RS04965 () | 933012..933359 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CJZ79_RS04970 () | 933359..934036 | - | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|