MGE detailed information
MGE type: Prophage MGE length: 48469 bp
Accession: NZ_CP022906 Location: 2003926..2052394 Organism: Staphylococcus aureus strain 546 Replicon: chromosome
Accession: NZ_CP022906 Location: 2003926..2052394 Organism: Staphylococcus aureus strain 546 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP99_RS10415 () | 1999028..1999864 | - | 837 | WP_000886468.1 | membrane protein | - |
| CGP99_RS10420 () | 1999873..2001390 | - | 1518 | WP_000535834.1 | ABC transporter ATP-binding protein | - |
| CGP99_RS10425 () | 2001405..2001719 | - | 315 | WP_000435806.1 | YfhH family protein | - |
| CGP99_RS10430 () | 2001697..2002515 | - | 819 | WP_001124419.1 | recombination regulator RecX | - |
| CGP99_RS10435 () | 2002776..2003585 | - | 810 | WP_000830380.1 | monofunctional peptidoglycan glycosyltransferase SgtB | - |
| CGP99_RS10440 () | 2003926..2004441 | - | 516 | WP_000163283.1 | type 1 glutamine amidotransferase | - |
| CGP99_RS10445 () | 2004572..2004733 | - | 162 | WP_001005407.1 | hypothetical protein | - |
| CGP99_RS10450 () | 2005080..2005160 | + | 81 | WP_100250272.1 | hypothetical protein | - |
| CGP99_RS10455 () | 2005206..2005889 | - | 684 | WP_000180531.1 | hypothetical protein | - |
| CGP99_RS10460 () | 2005886..2006068 | - | 183 | WP_000990948.1 | hypothetical protein | - |
| CGP99_RS10465 () | 2006291..2007215 | - | 925 | Protein_1924 | hypothetical protein | - |
| CGP99_RS10475 () | 2007834..2009288 | - | 1455 | WP_031924639.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CGP99_RS10480 () | 2009299..2009601 | - | 303 | WP_000339141.1 | phage holin | - |
| CGP99_RS10485 () | 2009737..2010036 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CGP99_RS10490 () | 2010082..2010246 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| CGP99_RS10495 () | 2010239..2010628 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CGP99_RS10500 () | 2010628..2012094 | - | 1467 | WP_115276633.1 | BppU family phage baseplate upper protein | - |
| CGP99_RS10505 () | 2012094..2014004 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| CGP99_RS10510 () | 2014020..2014310 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| CGP99_RS10515 () | 2014310..2015893 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| CGP99_RS10520 () | 2015902..2016726 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| CGP99_RS10525 () | 2016726..2022926 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| CGP99_RS10530 () | 2022940..2023098 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| CGP99_RS10535 () | 2023140..2023490 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| CGP99_RS10540 () | 2023548..2024003 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CGP99_RS10545 () | 2024095..2024736 | - | 642 | WP_000807536.1 | tail protein | - |
| CGP99_RS10550 () | 2024771..2025166 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CGP99_RS10555 () | 2025167..2025568 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| CGP99_RS10560 () | 2025565..2025897 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| CGP99_RS10565 () | 2025909..2026187 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| CGP99_RS10570 () | 2026256..2027419 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| CGP99_RS10575 () | 2027431..2028204 | - | 774 | WP_115276634.1 | Clp protease ClpP | - |
| CGP99_RS10580 () | 2028188..2029426 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| CGP99_RS10585 () | 2029431..2031122 | - | 1692 | WP_115276635.1 | terminase large subunit | - |
| CGP99_RS10590 () | 2031112..2031417 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CGP99_RS10595 () | 2031546..2031860 | - | 315 | WP_015978060.1 | HNH endonuclease | - |
| CGP99_RS10600 () | 2032017..2032454 | - | 438 | WP_031883903.1 | transcriptional regulator | - |
| CGP99_RS10605 () | 2032467..2033834 | - | 1368 | WP_115276660.1 | DEAD/DEAH box helicase | - |
| CGP99_RS10610 () | 2033815..2034105 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| CGP99_RS10615 () | 2034239..2034343 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| CGP99_RS10620 () | 2034446..2036893 | - | 2448 | WP_115276637.1 | virulence-associated E family protein | - |
| CGP99_RS10625 () | 2036946..2037146 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| CGP99_RS10630 () | 2037214..2037366 | - | 153 | WP_000595237.1 | transcriptional activator RinB | - |
| CGP99_RS10635 () | 2037359..2037595 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| CGP99_RS10640 () | 2037620..2037856 | - | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| CGP99_RS10645 () | 2037893..2038429 | - | 537 | WP_000185703.1 | dUTPase | - |
| CGP99_RS10650 () | 2038422..2038604 | - | 183 | WP_000028425.1 | hypothetical protein | Antitoxin Detail |
| CGP99_RS10655 () | 2038594..2038845 | - | 252 | WP_001065110.1 | DUF1024 family protein | Toxin Detail |
| CGP99_RS10660 () | 2038860..2039108 | - | 249 | WP_000177805.1 | phi PVL orf 51-like protein | - |
| CGP99_RS10665 () | 2039108..2039362 | - | 255 | WP_000111495.1 | DUF3310 domain-containing protein | - |
| CGP99_RS10670 () | 2039362..2039721 | - | 360 | WP_000117792.1 | hypothetical protein | - |
| CGP99_RS10675 () | 2039722..2039907 | - | 186 | WP_001187264.1 | DUF3113 family protein | - |
| CGP99_RS10680 () | 2039907..2040314 | - | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CGP99_RS10685 () | 2040324..2040545 | - | 222 | WP_001123684.1 | DUF3269 family protein | - |
| CGP99_RS10690 () | 2040558..2040716 | - | 159 | WP_000628839.1 | hypothetical protein | - |
| CGP99_RS10695 () | 2040713..2041498 | - | 786 | WP_114647922.1 | ATP-binding protein | - |
| CGP99_RS10700 () | 2041511..2042242 | - | 732 | WP_000132048.1 | helix-turn-helix domain-containing protein | - |
| CGP99_RS10710 () | 2042307..2042588 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| CGP99_RS15525 () | 2042581..2042730 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| CGP99_RS10715 () | 2042727..2043401 | - | 675 | WP_031928974.1 | phi PV83 orf 19-like protein | - |
| CGP99_RS10720 () | 2043413..2043856 | - | 444 | WP_001099010.1 | single-stranded DNA-binding protein | - |
| CGP99_RS10725 () | 2043853..2044503 | - | 651 | WP_000840496.1 | ERF family protein | - |
| CGP99_RS10730 () | 2044504..2045040 | - | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| CGP99_RS10735 () | 2045053..2045313 | - | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| CGP99_RS10740 () | 2045405..2045566 | - | 162 | WP_000066014.1 | DUF1270 domain-containing protein | - |
| CGP99_RS10745 () | 2045559..2045780 | - | 222 | WP_000594791.1 | hypothetical protein | - |
| CGP99_RS10750 () | 2045851..2046504 | + | 654 | WP_001803402.1 | hypothetical protein | - |
| CGP99_RS10755 () | 2046514..2046657 | - | 144 | WP_000939499.1 | hypothetical protein | - |
| CGP99_RS10760 () | 2046673..2047425 | - | 753 | WP_001148634.1 | phage antirepressor KilAC domain-containing protein | - |
| CGP99_RS10765 () | 2047427..2047612 | - | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| CGP99_RS10770 () | 2048058..2048540 | + | 483 | WP_000394410.1 | hypothetical protein | - |
| CGP99_RS10775 () | 2048641..2048820 | - | 180 | WP_033861758.1 | hypothetical protein | - |
| CGP99_RS10780 () | 2048835..2049278 | - | 444 | WP_115276661.1 | hypothetical protein | - |
| CGP99_RS10785 () | 2049326..2049538 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| CGP99_RS10790 () | 2049690..2050421 | + | 732 | WP_020807995.1 | XRE family transcriptional regulator | - |
| CGP99_RS10795 () | 2050457..2051137 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGP99_RS10800 () | 2051348..2052394 | + | 1047 | WP_001145721.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CGP99_RS10805 () | 2052439..2053584 | + | 1146 | WP_001245442.1 | radical SAM/CxCxxxxC motif protein YfkAB | - |
| CGP99_RS10810 () | 2053844..2054374 | - | 531 | WP_000184383.1 | acyl-CoA thioesterase | - |
| CGP99_RS10815 () | 2054464..2055720 | - | 1257 | WP_001795438.1 | aminopeptidase | - |
| CGP99_RS10820 () | 2055723..2055923 | - | 201 | WP_000180461.1 | DUF1128 family protein | - |
| CGP99_RS10825 () | 2056070..2056534 | + | 465 | WP_000228666.1 | low molecular weight phosphotyrosine protein phosphatase | - |
| CGP99_RS10830 () | 2056541..2056816 | + | 276 | WP_000428172.1 | YtxH domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|