MGE detailed information
MGE type: Prophage MGE length: 56338 bp
Accession: NZ_CP022905 Location: 975752..1032089 Organism: Staphylococcus aureus strain 628 Replicon: chromosome
Accession: NZ_CP022905 Location: 975752..1032089 Organism: Staphylococcus aureus strain 628 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGQ03_RS04955 () | 970879..971595 | - | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
| CGQ03_RS04960 () | 971614..972897 | - | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| CGQ03_RS04965 () | 972927..973070 | - | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| CGQ03_RS04970 () | 973073..973636 | - | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| CGQ03_RS04975 () | 973872..974006 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| CGQ03_RS04980 () | 974606..975391 | - | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| CGQ03_RS04985 () | 975752..976378 | - | 627 | WP_000522381.1 | nitroreductase family protein | - |
| CGQ03_RS04990 () | 976575..977783 | + | 1209 | WP_015445895.1 | hypothetical protein | VF |
| CGQ03_RS04995 () | 977808..978551 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| CGQ03_RS05000 () | 978726..979010 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CGQ03_RS05005 () | 979086..980702 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| CGQ03_RS05020 () | 981365..982684 | + | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
| CGQ03_RS05025 () | 982762..984069 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| CGQ03_RS05030 () | 984513..985736 | - | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| CGQ03_RS05035 () | 986075..987247 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| CGQ03_RS05040 () | 987504..988559 | + | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| CGQ03_RS05045 () | 988581..989597 | + | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| CGQ03_RS05050 () | 989835..990665 | - | 831 | Protein_926 | Phospholipase C | VF |
| CGQ03_RS05055 () | 990716..991753 | - | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CGQ03_RS05060 () | 991947..992651 | - | 705 | WP_000440838.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGQ03_RS05065 () | 992791..992958 | - | 168 | WP_000705241.1 | hypothetical protein | - |
| CGQ03_RS05070 () | 993028..993213 | - | 186 | WP_000109189.1 | hypothetical protein | - |
| CGQ03_RS15365 () | 993210..993356 | - | 147 | WP_000345949.1 | hypothetical protein | - |
| CGQ03_RS05075 () | 993430..994284 | - | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| CGQ03_RS05080 () | 994296..995012 | - | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| CGQ03_RS05085 () | 995176..995418 | + | 243 | WP_000639923.1 | DUF739 family protein | - |
| CGQ03_RS05090 () | 995431..995877 | + | 447 | WP_000435349.1 | hypothetical protein | - |
| CGQ03_RS05095 () | 995892..996032 | + | 141 | WP_000939495.1 | hypothetical protein | - |
| CGQ03_RS05100 () | 996025..996234 | - | 210 | WP_000772137.1 | hypothetical protein | - |
| CGQ03_RS05105 () | 996291..997040 | + | 750 | WP_001148587.1 | phage antirepressor KilAC domain-containing protein | - |
| CGQ03_RS05110 () | 997056..997253 | + | 198 | WP_001148856.1 | hypothetical protein | - |
| CGQ03_RS05115 () | 997240..997620 | - | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CGQ03_RS05120 () | 997675..997998 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CGQ03_RS05125 () | 997995..998156 | + | 162 | WP_000048129.1 | DUF1270 family protein | - |
| CGQ03_RS05130 () | 998251..998553 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CGQ03_RS05135 () | 998558..998818 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CGQ03_RS05140 () | 998827..999090 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| CGQ03_RS05145 () | 999099..1001042 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| CGQ03_RS05150 () | 1001044..1001964 | + | 921 | WP_000138478.1 | recombinase RecT | - |
| CGQ03_RS05155 () | 1002045..1002662 | + | 618 | WP_078065370.1 | MBL fold metallo-hydrolase | - |
| CGQ03_RS05160 () | 1002663..1003133 | + | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| CGQ03_RS05165 () | 1003163..1004056 | + | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| CGQ03_RS05170 () | 1004063..1004281 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| CGQ03_RS05175 () | 1004290..1004694 | + | 405 | WP_000401979.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CGQ03_RS05180 () | 1004707..1005078 | + | 372 | WP_000101279.1 | hypothetical protein | - |
| CGQ03_RS05185 () | 1005078..1005335 | + | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| CGQ03_RS05190 () | 1005332..1005580 | + | 249 | WP_000178987.1 | hypothetical protein | - |
| CGQ03_RS05195 () | 1005595..1005840 | + | 246 | WP_001065108.1 | DUF1024 family protein | - |
| CGQ03_RS05200 () | 1005837..1006373 | + | 537 | WP_000185693.1 | dUTPase | - |
| CGQ03_RS05205 () | 1006410..1006655 | + | 246 | WP_001282071.1 | hypothetical protein | - |
| CGQ03_RS05210 () | 1006652..1006858 | + | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| CGQ03_RS05215 () | 1006855..1007004 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CGQ03_RS05220 () | 1007004..1007204 | + | 201 | WP_001557462.1 | DUF1514 family protein | - |
| CGQ03_RS05225 () | 1007232..1007648 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| CGQ03_RS05230 () | 1007880..1008179 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| CGQ03_RS05235 () | 1008310..1008654 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| CGQ03_RS05240 () | 1008651..1010312 | + | 1662 | WP_000625087.1 | terminase large subunit | - |
| CGQ03_RS05245 () | 1010328..1011491 | + | 1164 | WP_000025268.1 | phage portal protein | - |
| CGQ03_RS05250 () | 1011475..1012212 | + | 738 | WP_000861911.1 | Clp protease ClpP | - |
| CGQ03_RS05255 () | 1012235..1013380 | + | 1146 | WP_000154564.1 | phage major capsid protein | - |
| CGQ03_RS05260 () | 1013400..1013660 | + | 261 | WP_000238237.1 | hypothetical protein | - |
| CGQ03_RS05265 () | 1013673..1013957 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CGQ03_RS05270 () | 1013941..1014303 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CGQ03_RS05275 () | 1014300..1014704 | + | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| CGQ03_RS05280 () | 1014701..1015108 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| CGQ03_RS05285 () | 1015109..1015750 | + | 642 | WP_000985141.1 | phage tail protein | - |
| CGQ03_RS05290 () | 1015711..1016016 | + | 306 | WP_094969686.1 | Ig-like domain-containing protein | - |
| CGQ03_RS05295 () | 1016067..1016417 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| CGQ03_RS15370 () | 1016468..1016605 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| CGQ03_RS05300 () | 1016662..1021173 | + | 4512 | WP_000504572.1 | phage tail tape measure protein | - |
| CGQ03_RS05305 () | 1021170..1022654 | + | 1485 | WP_000567391.1 | phage tail family protein | - |
| CGQ03_RS05310 () | 1022670..1026455 | + | 3786 | WP_000582178.1 | hypothetical protein | - |
| CGQ03_RS05315 () | 1026445..1026597 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| CGQ03_RS05320 () | 1026644..1026931 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| CGQ03_RS05325 () | 1026989..1027285 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| CGQ03_RS05330 () | 1027435..1027611 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 1027599..1027773 | - | 175 | - | - | Antitoxin Detail |
| CGQ03_RS05340 () | 1027823..1028077 | + | 255 | WP_000611512.1 | phage holin | - |
| CGQ03_RS05345 () | 1028089..1028844 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| CGQ03_RS05350 () | 1029035..1029526 | + | 492 | WP_000919350.1 | Staphylokinase | VF |
| CGQ03_RS05360 () | 1030176..1030511 | + | 336 | Protein_989 | SH3 domain-containing protein | - |
| CGQ03_RS05365 () | 1030606..1031055 | - | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| CGQ03_RS05370 () | 1031739..1032089 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| CGQ03_RS05375 () | 1032142..1032402 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| CGQ03_RS05385 () | 1032713..1032892 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| CGQ03_RS05390 () | 1033214..1033464 | - | 251 | Protein_994 | sphingomyelin phosphodiesterase | - |
| CGQ03_RS05395 () | 1033850..1035280 | + | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| CGQ03_RS05400 () | 1035295..1035585 | + | 291 | WP_000671712.1 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|