MGE detailed information
MGE type: Prophage MGE length: 48137 bp
Accession: NZ_CP022905 Location: 1939824..1987960 Organism: Staphylococcus aureus strain 628 Replicon: chromosome
Accession: NZ_CP022905 Location: 1939824..1987960 Organism: Staphylococcus aureus strain 628 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGQ03_RS10025 () | 1935008..1935691 | - | 684 | WP_000789821.1 | heme uptake protein IsdC | - |
| CGQ03_RS10030 () | 1935900..1936952 | + | 1053 | WP_000160859.1 | LPXTG-anchored heme-scavenging protein IsdA | - |
| CGQ03_RS10035 () | 1937155..1939092 | + | 1938 | WP_001041583.1 | heme uptake protein IsdB | - |
| CGQ03_RS10040 () | 1939824..1941269 | - | 1446 | WP_001148135.1 | SH3 domain-containing protein | - |
| CGQ03_RS10045 () | 1941250..1941687 | - | 438 | WP_000354128.1 | phage holin | - |
| CGQ03_RS10050 () | 1941743..1942138 | - | 396 | WP_000398878.1 | hypothetical protein | - |
| CGQ03_RS10055 () | 1942144..1943316 | - | 1173 | WP_033860047.1 | BppU family phage baseplate upper protein | - |
| CGQ03_RS10060 () | 1943329..1945203 | - | 1875 | WP_000524043.1 | Bifunctional autolysin | VF |
| CGQ03_RS10065 () | 1945340..1945639 | - | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| CGQ03_RS10070 () | 1945680..1945853 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| CGQ03_RS10075 () | 1945857..1946234 | - | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| CGQ03_RS10080 () | 1946234..1948057 | - | 1824 | WP_023487056.1 | BppU family phage baseplate upper protein | - |
| CGQ03_RS10085 () | 1948057..1949955 | - | 1899 | WP_000323256.1 | hypothetical protein | - |
| CGQ03_RS10090 () | 1949968..1951854 | - | 1887 | WP_001604154.1 | phage tail protein | - |
| CGQ03_RS10095 () | 1951865..1952806 | - | 942 | WP_001604155.1 | phage tail family protein | - |
| CGQ03_RS10100 () | 1952821..1955706 | - | 2886 | WP_031870344.1 | terminase | - |
| CGQ03_RS10105 () | 1955710..1955994 | - | 285 | WP_000880587.1 | hypothetical protein | - |
| CGQ03_RS10110 () | 1956039..1956545 | - | 507 | WP_000134337.1 | hypothetical protein | - |
| CGQ03_RS10115 () | 1956612..1957169 | - | 558 | WP_000057582.1 | tail protein | - |
| CGQ03_RS10120 () | 1957170..1957595 | - | 426 | WP_000270190.1 | DUF3168 domain-containing protein | - |
| CGQ03_RS10125 () | 1957608..1957766 | - | 159 | Protein_1856 | HK97 gp10 family phage protein | - |
| CGQ03_RS10130 () | 1957958..1958641 | - | 684 | WP_044593021.1 | hypothetical protein | - |
| CGQ03_RS10135 () | 1958734..1959024 | - | 291 | WP_044593020.1 | HK97 gp10 family phage protein | - |
| CGQ03_RS10140 () | 1959011..1959346 | - | 336 | WP_031870341.1 | phage head closure protein | - |
| CGQ03_RS10145 () | 1959339..1959653 | - | 315 | WP_015978368.1 | phage head-tail connector protein | - |
| CGQ03_RS10150 () | 1959653..1959979 | - | 327 | WP_031870340.1 | Rho termination factor N-terminal domain-containing protein | - |
| CGQ03_RS10155 () | 1959996..1960955 | - | 960 | WP_001044072.1 | hypothetical protein | - |
| CGQ03_RS10160 () | 1960967..1961491 | - | 525 | WP_000366930.1 | phage scaffolding protein | - |
| CGQ03_RS10165 () | 1961589..1962569 | - | 981 | WP_015978359.1 | phage head morphogenesis protein | - |
| CGQ03_RS10170 () | 1962508..1963986 | - | 1479 | WP_049955470.1 | phage portal protein | - |
| CGQ03_RS10175 () | 1963940..1965148 | - | 1209 | WP_001606760.1 | PBSX family phage terminase large subunit | - |
| CGQ03_RS15390 () | 1965141..1965635 | - | 495 | WP_031870337.1 | terminase | - |
| CGQ03_RS10185 () | 1965964..1966386 | - | 423 | WP_000162701.1 | RinA family phage transcriptional activator | - |
| CGQ03_RS10190 () | 1966410..1966556 | - | 147 | WP_000989960.1 | hypothetical protein | - |
| CGQ03_RS10195 () | 1966557..1966730 | - | 174 | WP_000591891.1 | transcriptional activator RinB | - |
| CGQ03_RS10200 () | 1966723..1966959 | - | 237 | WP_031870336.1 | hypothetical protein | - |
| CGQ03_RS10205 () | 1966984..1967220 | - | 237 | WP_031870335.1 | DUF1381 domain-containing protein | - |
| CGQ03_RS10210 () | 1967257..1967799 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| CGQ03_RS10215 () | 1967804..1968040 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| CGQ03_RS10220 () | 1968033..1968341 | - | 309 | WP_000144710.1 | hypothetical protein | - |
| CGQ03_RS10225 () | 1968338..1968685 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| CGQ03_RS10230 () | 1968682..1969083 | - | 402 | WP_000695762.1 | hypothetical protein | - |
| CGQ03_RS10235 () | 1969096..1969344 | - | 249 | WP_012068339.1 | hypothetical protein | - |
| CGQ03_RS10240 () | 1969344..1969598 | - | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| CGQ03_RS10245 () | 1969598..1969648 | - | 51 | WP_111023892.1 | hypothetical protein | - |
| CGQ03_RS10250 () | 1969684..1969869 | - | 186 | WP_001187230.1 | DUF3113 family protein | - |
| CGQ03_RS10255 () | 1969874..1970278 | - | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
| CGQ03_RS10260 () | 1970275..1970700 | - | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| CGQ03_RS10265 () | 1970710..1970931 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| CGQ03_RS10270 () | 1970935..1971150 | - | 216 | WP_001024405.1 | hypothetical protein | - |
| CGQ03_RS10275 () | 1971147..1972388 | - | 1242 | WP_015445891.1 | AAA family ATPase | - |
| CGQ03_RS10280 () | 1972385..1972741 | - | 357 | WP_001132243.1 | hypothetical protein | - |
| CGQ03_RS10285 () | 1972741..1973496 | - | 756 | WP_001037657.1 | DnaD domain protein | - |
| CGQ03_RS10290 () | 1973489..1974163 | - | 675 | WP_015445893.1 | hypothetical protein | - |
| CGQ03_RS10295 () | 1974164..1974715 | - | 552 | WP_001004506.1 | NUMOD4 motif-containing HNH endonuclease | - |
| CGQ03_RS10300 () | 1974726..1975151 | - | 426 | WP_000934384.1 | single-stranded DNA-binding protein | - |
| CGQ03_RS10305 () | 1975151..1975774 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| CGQ03_RS10310 () | 1975767..1975988 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| CGQ03_RS10315 () | 1975998..1976258 | - | 261 | WP_000291076.1 | hypothetical protein ; Integrase | Integrase |
| CGQ03_RS10320 () | 1976352..1976513 | - | 162 | WP_000066026.1 | DUF1270 family protein | - |
| CGQ03_RS15395 () | 1976506..1976643 | - | 138 | WP_000230552.1 | hypothetical protein | - |
| CGQ03_RS10325 () | 1976693..1976923 | + | 231 | WP_000395455.1 | hypothetical protein | - |
| CGQ03_RS10330 () | 1977090..1977842 | - | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| CGQ03_RS10335 () | 1977844..1978029 | - | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| CGQ03_RS10340 () | 1978469..1978678 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| CGQ03_RS10345 () | 1978668..1978811 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| CGQ03_RS10350 () | 1978826..1979269 | - | 444 | WP_023487065.1 | hypothetical protein | - |
| CGQ03_RS10355 () | 1979282..1979530 | - | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| CGQ03_RS10360 () | 1979694..1980017 | + | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CGQ03_RS10365 () | 1980030..1980494 | + | 465 | WP_000525007.1 | hypothetical protein | Toxin Detail |
| CGQ03_RS10370 () | 1980526..1981206 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGQ03_RS10375 () | 1981413..1982798 | + | 1386 | WP_000861313.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| CGQ03_RS10380 () | 1982915..1983088 | - | 174 | WP_000290472.1 | 50S ribosomal protein L32 | - |
| CGQ03_RS10390 () | 1983168..1983725 | - | 558 | WP_000872158.1 | DUF177 domain-containing protein | - |
| CGQ03_RS10395 () | 1983852..1984991 | + | 1140 | WP_000843611.1 | nucleotidyltransferase | - |
| CGQ03_RS10400 () | 1985053..1985535 | - | 483 | WP_000401377.1 | Phosphopantetheine adenylyltransferase | VF |
| CGQ03_RS10405 () | 1985537..1986079 | - | 543 | WP_001263796.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CGQ03_RS10410 () | 1986149..1986538 | + | 390 | WP_000814565.1 | hypothetical protein | - |
| CGQ03_RS10415 () | 1986541..1986795 | - | 255 | WP_001049150.1 | YlbG family protein | - |
| CGQ03_RS10420 () | 1987034..1987960 | + | 927 | WP_000757575.1 | glycerophosphodiester phosphodiesterase | - |
| CGQ03_RS10425 () | 1988023..1988457 | - | 435 | WP_000606480.1 | YlbF family regulator | - |
| CGQ03_RS10430 () | 1988473..1989510 | - | 1038 | WP_000733409.1 | CAP domain-containing protein | - |
| CGQ03_RS10440 () | 1989837..1990298 | - | 462 | WP_000538766.1 | DUF420 domain-containing protein | - |
| CGQ03_RS10445 () | 1990323..1991234 | - | 912 | WP_015445807.1 | heme o synthase | - |
| CGQ03_RS10450 () | 1991674..1992585 | + | 912 | WP_000467123.1 | heme A synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|