MGE detailed information
MGE type: Prophage MGE length: 56338 bp
Accession: NZ_CP022893 Location: 975779..1032116 Organism: Staphylococcus aureus strain 61 Replicon: chromosome
Accession: NZ_CP022893 Location: 975779..1032116 Organism: Staphylococcus aureus strain 61 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP89_RS04955 () | 970906..971622 | - | 717 | Protein_910 | response regulator transcription factor | - |
| CGP89_RS04960 () | 971641..972924 | - | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| CGP89_RS04965 () | 972954..973097 | - | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| CGP89_RS04970 () | 973100..973663 | - | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| CGP89_RS04975 () | 973899..974033 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| CGP89_RS04980 () | 974633..975418 | - | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| CGP89_RS04985 () | 975779..976405 | - | 627 | WP_000522381.1 | nitroreductase family protein | - |
| CGP89_RS04990 () | 976602..977810 | + | 1209 | WP_015445895.1 | hypothetical protein | VF |
| CGP89_RS04995 () | 977835..978578 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| CGP89_RS05000 () | 978753..979037 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CGP89_RS05005 () | 979113..980729 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| CGP89_RS05020 () | 981392..982711 | + | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
| CGP89_RS05025 () | 982789..984096 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| CGP89_RS05030 () | 984540..985763 | - | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| CGP89_RS05035 () | 986102..987274 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| CGP89_RS05040 () | 987531..988586 | + | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| CGP89_RS05045 () | 988608..989624 | + | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| CGP89_RS05050 () | 989862..990692 | - | 831 | Protein_927 | Phospholipase C | VF |
| CGP89_RS05055 () | 990743..991780 | - | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CGP89_RS05060 () | 991974..992678 | - | 705 | WP_000440838.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGP89_RS05065 () | 992818..992985 | - | 168 | WP_000705241.1 | hypothetical protein | - |
| CGP89_RS05070 () | 993055..993240 | - | 186 | WP_000109189.1 | hypothetical protein | - |
| CGP89_RS15365 () | 993237..993383 | - | 147 | WP_000345949.1 | hypothetical protein | - |
| CGP89_RS05075 () | 993457..994311 | - | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| CGP89_RS05080 () | 994323..995039 | - | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| CGP89_RS05085 () | 995203..995445 | + | 243 | WP_000639923.1 | DUF739 family protein | - |
| CGP89_RS05090 () | 995458..995904 | + | 447 | WP_000435349.1 | hypothetical protein | - |
| CGP89_RS05095 () | 995919..996059 | + | 141 | WP_000939495.1 | hypothetical protein | - |
| CGP89_RS05100 () | 996052..996261 | - | 210 | WP_000772137.1 | hypothetical protein | - |
| CGP89_RS05105 () | 996318..997067 | + | 750 | WP_001148587.1 | phage antirepressor KilAC domain-containing protein | - |
| CGP89_RS05110 () | 997083..997280 | + | 198 | WP_001148856.1 | hypothetical protein | - |
| CGP89_RS05115 () | 997267..997647 | - | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CGP89_RS05120 () | 997702..998025 | + | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CGP89_RS05125 () | 998022..998183 | + | 162 | WP_000048129.1 | DUF1270 family protein | - |
| CGP89_RS05130 () | 998278..998580 | + | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CGP89_RS05135 () | 998585..998845 | + | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CGP89_RS05140 () | 998854..999117 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| CGP89_RS05145 () | 999126..1001069 | + | 1944 | WP_000700555.1 | AAA family ATPase | - |
| CGP89_RS05150 () | 1001071..1001991 | + | 921 | WP_000138478.1 | recombinase RecT | - |
| CGP89_RS05155 () | 1002072..1002689 | + | 618 | WP_078065370.1 | MBL fold metallo-hydrolase | - |
| CGP89_RS05160 () | 1002690..1003160 | + | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| CGP89_RS05165 () | 1003190..1004083 | + | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| CGP89_RS05170 () | 1004090..1004308 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| CGP89_RS05175 () | 1004317..1004721 | + | 405 | WP_000401979.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CGP89_RS05180 () | 1004734..1005105 | + | 372 | WP_000101279.1 | hypothetical protein | - |
| CGP89_RS05185 () | 1005105..1005362 | + | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| CGP89_RS05190 () | 1005359..1005607 | + | 249 | WP_000178987.1 | hypothetical protein | - |
| CGP89_RS05195 () | 1005622..1005867 | + | 246 | WP_001065108.1 | DUF1024 family protein | - |
| CGP89_RS05200 () | 1005864..1006400 | + | 537 | WP_000185693.1 | dUTPase | - |
| CGP89_RS05205 () | 1006437..1006682 | + | 246 | WP_001282071.1 | hypothetical protein | - |
| CGP89_RS05210 () | 1006679..1006885 | + | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| CGP89_RS05215 () | 1006882..1007031 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CGP89_RS05220 () | 1007031..1007231 | + | 201 | WP_001557462.1 | DUF1514 family protein | - |
| CGP89_RS05225 () | 1007259..1007675 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| CGP89_RS05230 () | 1007907..1008206 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| CGP89_RS05235 () | 1008337..1008681 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| CGP89_RS05240 () | 1008678..1010339 | + | 1662 | WP_000625087.1 | terminase large subunit | - |
| CGP89_RS05245 () | 1010355..1011518 | + | 1164 | WP_000025268.1 | phage portal protein | - |
| CGP89_RS05250 () | 1011502..1012239 | + | 738 | WP_000861911.1 | Clp protease ClpP | - |
| CGP89_RS05255 () | 1012262..1013407 | + | 1146 | WP_000154564.1 | phage major capsid protein | - |
| CGP89_RS05260 () | 1013427..1013687 | + | 261 | WP_000238237.1 | hypothetical protein | - |
| CGP89_RS05265 () | 1013700..1013984 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CGP89_RS05270 () | 1013968..1014330 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CGP89_RS05275 () | 1014327..1014731 | + | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| CGP89_RS05280 () | 1014728..1015135 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| CGP89_RS05285 () | 1015136..1015777 | + | 642 | WP_000985141.1 | phage tail protein | - |
| CGP89_RS05290 () | 1015738..1016043 | + | 306 | WP_094969686.1 | Ig-like domain-containing protein | - |
| CGP89_RS05295 () | 1016094..1016444 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| CGP89_RS15370 () | 1016495..1016632 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| CGP89_RS05300 () | 1016689..1021200 | + | 4512 | WP_000504572.1 | phage tail tape measure protein | - |
| CGP89_RS05305 () | 1021197..1022681 | + | 1485 | WP_000567391.1 | phage tail family protein | - |
| CGP89_RS05310 () | 1022697..1026482 | + | 3786 | WP_000582178.1 | hypothetical protein | - |
| CGP89_RS05315 () | 1026472..1026624 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| CGP89_RS05320 () | 1026671..1026958 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| CGP89_RS05325 () | 1027016..1027312 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| CGP89_RS05330 () | 1027462..1027638 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 1027626..1027800 | - | 175 | - | - | Antitoxin Detail |
| CGP89_RS05340 () | 1027850..1028104 | + | 255 | WP_000611512.1 | phage holin | - |
| CGP89_RS05345 () | 1028116..1028871 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| CGP89_RS05350 () | 1029062..1029553 | + | 492 | WP_000919350.1 | Staphylokinase | VF |
| CGP89_RS05360 () | 1030203..1030538 | + | 336 | Protein_990 | SH3 domain-containing protein | - |
| CGP89_RS05365 () | 1030633..1031082 | - | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| CGP89_RS05370 () | 1031766..1032116 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| CGP89_RS05375 () | 1032169..1032429 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| CGP89_RS05385 () | 1032740..1032919 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| CGP89_RS05390 () | 1033241..1033491 | - | 251 | Protein_995 | sphingomyelin phosphodiesterase | - |
| CGP89_RS05395 () | 1033877..1035307 | + | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| CGP89_RS05400 () | 1035322..1035612 | + | 291 | WP_000671712.1 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|