MGE detailed information
MGE type: Prophage MGE length: 48137 bp
Accession: NZ_CP022893 Location: 1939795..1987931 Organism: Staphylococcus aureus strain 61 Replicon: chromosome
Accession: NZ_CP022893 Location: 1939795..1987931 Organism: Staphylococcus aureus strain 61 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP89_RS10025 () | 1934979..1935662 | - | 684 | WP_000789821.1 | heme uptake protein IsdC | - |
| CGP89_RS10030 () | 1935871..1936923 | + | 1053 | WP_000160859.1 | LPXTG-anchored heme-scavenging protein IsdA | - |
| CGP89_RS10035 () | 1937126..1939063 | + | 1938 | WP_001041583.1 | heme uptake protein IsdB | - |
| CGP89_RS10040 () | 1939795..1941240 | - | 1446 | WP_001148135.1 | SH3 domain-containing protein | - |
| CGP89_RS10045 () | 1941221..1941658 | - | 438 | WP_000354128.1 | phage holin | - |
| CGP89_RS10050 () | 1941714..1942109 | - | 396 | WP_000398878.1 | hypothetical protein | - |
| CGP89_RS10055 () | 1942115..1943287 | - | 1173 | WP_033860047.1 | BppU family phage baseplate upper protein | - |
| CGP89_RS10060 () | 1943300..1945174 | - | 1875 | WP_000524043.1 | Bifunctional autolysin | VF |
| CGP89_RS10065 () | 1945311..1945610 | - | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| CGP89_RS10070 () | 1945651..1945824 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| CGP89_RS10075 () | 1945828..1946205 | - | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| CGP89_RS10080 () | 1946205..1948028 | - | 1824 | WP_023487056.1 | BppU family phage baseplate upper protein | - |
| CGP89_RS10085 () | 1948028..1949926 | - | 1899 | WP_000323256.1 | hypothetical protein | - |
| CGP89_RS10090 () | 1949939..1951825 | - | 1887 | WP_001604154.1 | phage tail protein | - |
| CGP89_RS10095 () | 1951836..1952777 | - | 942 | WP_001604155.1 | phage tail family protein | - |
| CGP89_RS10100 () | 1952792..1955677 | - | 2886 | WP_031870344.1 | terminase | - |
| CGP89_RS10105 () | 1955681..1955965 | - | 285 | WP_000880587.1 | hypothetical protein | - |
| CGP89_RS10110 () | 1956010..1956516 | - | 507 | WP_000134337.1 | hypothetical protein | - |
| CGP89_RS10115 () | 1956583..1957140 | - | 558 | WP_000057582.1 | tail protein | - |
| CGP89_RS10120 () | 1957141..1957566 | - | 426 | WP_000270190.1 | DUF3168 domain-containing protein | - |
| CGP89_RS10125 () | 1957579..1957737 | - | 159 | Protein_1856 | HK97 gp10 family phage protein | - |
| CGP89_RS10130 () | 1957929..1958612 | - | 684 | WP_044593021.1 | hypothetical protein | - |
| CGP89_RS10135 () | 1958705..1958995 | - | 291 | WP_044593020.1 | HK97 gp10 family phage protein | - |
| CGP89_RS10140 () | 1958982..1959317 | - | 336 | WP_031870341.1 | phage head closure protein | - |
| CGP89_RS10145 () | 1959310..1959624 | - | 315 | WP_015978368.1 | phage head-tail connector protein | - |
| CGP89_RS10150 () | 1959624..1959950 | - | 327 | WP_031870340.1 | Rho termination factor N-terminal domain-containing protein | - |
| CGP89_RS10155 () | 1959967..1960926 | - | 960 | WP_001044072.1 | hypothetical protein | - |
| CGP89_RS10160 () | 1960938..1961462 | - | 525 | WP_000366930.1 | phage scaffolding protein | - |
| CGP89_RS10165 () | 1961560..1962540 | - | 981 | WP_015978359.1 | phage head morphogenesis protein | - |
| CGP89_RS10170 () | 1962479..1963957 | - | 1479 | WP_049955470.1 | phage portal protein | - |
| CGP89_RS10175 () | 1963911..1965119 | - | 1209 | WP_001606760.1 | PBSX family phage terminase large subunit | - |
| CGP89_RS15385 () | 1965112..1965606 | - | 495 | WP_031870337.1 | terminase | - |
| CGP89_RS10185 () | 1965935..1966357 | - | 423 | WP_000162701.1 | RinA family phage transcriptional activator | - |
| CGP89_RS10190 () | 1966381..1966527 | - | 147 | WP_000989960.1 | hypothetical protein | - |
| CGP89_RS10195 () | 1966528..1966701 | - | 174 | WP_000591891.1 | transcriptional activator RinB | - |
| CGP89_RS10200 () | 1966694..1966930 | - | 237 | WP_031870336.1 | hypothetical protein | - |
| CGP89_RS10205 () | 1966955..1967191 | - | 237 | WP_031870335.1 | DUF1381 domain-containing protein | - |
| CGP89_RS10210 () | 1967228..1967770 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| CGP89_RS10215 () | 1967775..1968011 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| CGP89_RS10220 () | 1968004..1968312 | - | 309 | WP_000144710.1 | hypothetical protein | - |
| CGP89_RS10225 () | 1968309..1968656 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| CGP89_RS10230 () | 1968653..1969054 | - | 402 | WP_000695762.1 | hypothetical protein | - |
| CGP89_RS10235 () | 1969067..1969315 | - | 249 | WP_012068339.1 | hypothetical protein | - |
| CGP89_RS10240 () | 1969315..1969569 | - | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| CGP89_RS10245 () | 1969569..1969619 | - | 51 | WP_111023892.1 | hypothetical protein | - |
| CGP89_RS10250 () | 1969655..1969840 | - | 186 | WP_001187230.1 | DUF3113 family protein | - |
| CGP89_RS10255 () | 1969845..1970249 | - | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
| CGP89_RS10260 () | 1970246..1970671 | - | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| CGP89_RS10265 () | 1970681..1970902 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| CGP89_RS10270 () | 1970906..1971121 | - | 216 | WP_001024405.1 | hypothetical protein | - |
| CGP89_RS10275 () | 1971118..1972359 | - | 1242 | WP_015445891.1 | AAA family ATPase | - |
| CGP89_RS10280 () | 1972356..1972712 | - | 357 | WP_001132243.1 | hypothetical protein | - |
| CGP89_RS10285 () | 1972712..1973467 | - | 756 | WP_001037657.1 | DnaD domain protein | - |
| CGP89_RS10290 () | 1973460..1974134 | - | 675 | WP_015445893.1 | hypothetical protein | - |
| CGP89_RS10295 () | 1974135..1974686 | - | 552 | WP_001004506.1 | NUMOD4 motif-containing HNH endonuclease | - |
| CGP89_RS10300 () | 1974697..1975122 | - | 426 | WP_000934384.1 | single-stranded DNA-binding protein | - |
| CGP89_RS10305 () | 1975122..1975745 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| CGP89_RS10310 () | 1975738..1975959 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| CGP89_RS10315 () | 1975969..1976229 | - | 261 | WP_000291076.1 | hypothetical protein ; Integrase | Integrase |
| CGP89_RS10320 () | 1976323..1976484 | - | 162 | WP_000066026.1 | DUF1270 family protein | - |
| CGP89_RS10325 () | 1976664..1976894 | + | 231 | WP_000395455.1 | hypothetical protein | - |
| CGP89_RS10330 () | 1977061..1977813 | - | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| CGP89_RS10335 () | 1977815..1978000 | - | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| CGP89_RS10340 () | 1978440..1978649 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| CGP89_RS10345 () | 1978639..1978782 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| CGP89_RS10350 () | 1978797..1979240 | - | 444 | WP_023487065.1 | hypothetical protein | - |
| CGP89_RS10355 () | 1979253..1979501 | - | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| CGP89_RS10360 () | 1979665..1979988 | + | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CGP89_RS10365 () | 1980001..1980465 | + | 465 | WP_000525007.1 | hypothetical protein | Toxin Detail |
| CGP89_RS10370 () | 1980497..1981177 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGP89_RS10375 () | 1981384..1982769 | + | 1386 | WP_000861313.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| CGP89_RS10380 () | 1982886..1983059 | - | 174 | WP_000290472.1 | 50S ribosomal protein L32 | - |
| CGP89_RS10390 () | 1983139..1983696 | - | 558 | WP_000872158.1 | DUF177 domain-containing protein | - |
| CGP89_RS10395 () | 1983823..1984962 | + | 1140 | WP_000843611.1 | nucleotidyltransferase | - |
| CGP89_RS10400 () | 1985024..1985506 | - | 483 | WP_000401377.1 | Phosphopantetheine adenylyltransferase | VF |
| CGP89_RS10405 () | 1985508..1986050 | - | 543 | WP_001263796.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CGP89_RS10410 () | 1986120..1986509 | + | 390 | WP_000814565.1 | hypothetical protein | - |
| CGP89_RS10415 () | 1986512..1986766 | - | 255 | WP_001049150.1 | YlbG family protein | - |
| CGP89_RS10420 () | 1987005..1987931 | + | 927 | WP_000757575.1 | glycerophosphodiester phosphodiesterase | - |
| CGP89_RS10425 () | 1987994..1988428 | - | 435 | WP_000606480.1 | YlbF family regulator | - |
| CGP89_RS10430 () | 1988444..1989481 | - | 1038 | WP_000733409.1 | CAP domain-containing protein | - |
| CGP89_RS10440 () | 1989808..1990269 | - | 462 | WP_000538766.1 | DUF420 domain-containing protein | - |
| CGP89_RS10445 () | 1990294..1991205 | - | 912 | WP_015445807.1 | heme o synthase | - |
| CGP89_RS10450 () | 1991645..1992556 | + | 912 | WP_000467123.1 | heme A synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|