MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70062 bp
Accession: NZ_CP022659 Location: 1..70062 Organism: Salmonella enterica subsp. enterica strain RM11060 Replicon: plasmid pRM11060-1
Accession: NZ_CP022659 Location: 1..70062 Organism: Salmonella enterica subsp. enterica strain RM11060 Replicon: plasmid pRM11060-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGA23_RS24990 () | 549..1394 | - | 846 | Protein_1 | phage capsid protein | - |
| CGA23_RS24995 () | 1548..3258 | + | 1711 | Protein_2 | oxidoreductase | - |
| CGA23_RS25000 () | 3259..4308 | + | 1050 | WP_000014576.1 | phage portal protein | - |
| CGA23_RS25005 () | 4711..5823 | - | 1113 | WP_024153924.1 | XRE family transcriptional regulator | - |
| CGA23_RS25010 () | 5837..6430 | - | 594 | WP_024153925.1 | hypothetical protein | - |
| CGA23_RS25015 () | 6506..8866 | - | 2361 | WP_058648989.1 | replication endonuclease | - |
| CGA23_RS25020 () | 8863..9897 | - | 1035 | WP_000128157.1 | DNA cytosine methyltransferase | - |
| CGA23_RS25025 () | 9898..10095 | - | 198 | WP_097361544.1 | hypothetical protein | - |
| CGA23_RS25030 () | 10095..10976 | - | 882 | WP_000620901.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CGA23_RS25035 () | 10978..11190 | - | 213 | WP_000166617.1 | hypothetical protein | - |
| CGA23_RS25040 () | 11234..11416 | - | 183 | WP_000946669.1 | DUF3927 family protein | - |
| CGA23_RS25045 () | 11416..11850 | - | 435 | WP_000482341.1 | TerB family tellurite resistance protein | - |
| CGA23_RS25050 () | 11945..12175 | - | 231 | WP_000543629.1 | DUF2724 domain-containing protein | - |
| CGA23_RS25055 () | 12165..12371 | - | 207 | WP_000290619.1 | DUF4761 family protein | - |
| CGA23_RS25060 () | 12382..12585 | - | 204 | WP_000078935.1 | hypothetical protein | - |
| CGA23_RS25065 () | 12596..12877 | - | 282 | WP_031607754.1 | hypothetical protein | - |
| CGA23_RS25070 () | 13016..13471 | + | 456 | WP_000422421.1 | hypothetical protein | - |
| CGA23_RS25075 () | 13422..13883 | - | 462 | WP_024153929.1 | hypothetical protein | - |
| CGA23_RS25080 () | 13955..14308 | + | 354 | WP_099706372.1 | helix-turn-helix domain-containing protein | - |
| CGA23_RS25085 () | 14378..15358 | + | 981 | WP_079953016.1 | tyrosine-type recombinase/integrase | - |
| CGA23_RS25090 () | 15535..16035 | - | 501 | WP_001233463.1 | cell-envelope stress modulator CpxP | - |
| CGA23_RS25095 () | 16186..16884 | + | 699 | WP_001033731.1 | Transcriptional regulatory protein CpxR | VF |
| CGA23_RS25100 () | 16881..18254 | + | 1374 | WP_000580402.1 | Sensor histidine kinase CpxA | VF |
| CGA23_RS25105 () | 18305..18700 | - | 396 | WP_021294276.1 | nuclear transport factor 2 family protein | - |
| CGA23_RS25110 () | 18712..19464 | - | 753 | WP_011233226.1 | 6-N-hydroxylaminopurine resistance protein | - |
| CGA23_RS25115 () | 19471..20091 | - | 621 | WP_097361573.1 | Superoxide dismutase [Mn] | VF |
| CGA23_RS25120 () | 20420..21403 | + | 984 | WP_000812816.1 | TRAP transporter substrate-binding protein | - |
| CGA23_RS25125 () | 21422..21937 | + | 516 | WP_001091413.1 | TRAP transporter small permease | - |
| CGA23_RS25130 () | 21930..23237 | + | 1308 | WP_000566800.1 | TRAP transporter large permease | - |
| CGA23_RS25135 () | 23395..24078 | - | 684 | WP_000378721.1 | oligogalacturonate-specific porin KdgM family protein | - |
| CGA23_RS25140 () | 24697..25731 | + | 1035 | WP_000063541.1 | L-rhamnose/proton symporter RhaT | - |
| CGA23_RS25145 () | 25728..26576 | - | 849 | WP_000013291.1 | HTH-type transcriptional activator RhaR | VF |
| CGA23_RS25150 () | 26729..27565 | - | 837 | WP_000217112.1 | HTH-type transcriptional activator RhaS | - |
| CGA23_RS25155 () | 27853..29322 | + | 1470 | WP_023197765.1 | rhamnulokinase | - |
| CGA23_RS25160 () | 29319..30578 | + | 1260 | WP_001661624.1 | L-rhamnose isomerase | - |
| CGA23_RS25165 () | 30721..31548 | + | 828 | WP_001179690.1 | rhamnulose-1-phosphate aldolase | - |
| CGA23_RS25170 () | 31675..32823 | + | 1149 | WP_097361574.1 | NAD-dependent methanol dehydrogenase | VF |
| CGA23_RS25175 () | 32820..33134 | + | 315 | WP_000619475.1 | L-rhamnose mutarotase | - |
| CGA23_RS25180 () | 33223..33789 | - | 567 | WP_010989088.1 | XRE family transcriptional regulator | - |
| CGA23_RS25185 () | 33872..34531 | + | 660 | WP_000683586.1 | AzlC family ABC transporter permease | - |
| CGA23_RS25190 () | 34531..34854 | + | 324 | WP_000527677.1 | AzlD domain-containing protein | - |
| CGA23_RS25195 () | 35198..36298 | - | 1101 | WP_000828039.1 | DUF3829 domain-containing protein | - |
| CGA23_RS25200 () | 36481..37512 | + | 1032 | WP_000710966.1 | YiiG family protein | - |
| CGA23_RS25205 () | 37780..38616 | - | 837 | WP_001059740.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| CGA23_RS25215 () | 38811..41861 | + | 3051 | WP_077248424.1 | formate dehydrogenase-N subunit alpha | - |
| CGA23_RS25220 () | 41874..42776 | + | 903 | WP_000331361.1 | formate dehydrogenase subunit beta | - |
| CGA23_RS25225 () | 42773..43408 | + | 636 | WP_000829025.1 | formate dehydrogenase cytochrome b556 subunit | - |
| CGA23_RS25230 () | 43405..44334 | + | 930 | WP_000027730.1 | formate dehydrogenase accessory protein FdhE | - |
| CGA23_RS25235 () | 44381..44671 | - | 291 | WP_000362050.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| CGA23_RS25240 () | 44672..44983 | - | 312 | WP_001159630.1 | cytotoxic translational repressor of toxin-antitoxin stability system | Toxin Detail |
| CGA23_RS25245 () | 45201..46130 | + | 930 | WP_021294279.1 | alpha/beta hydrolase | - |
| CGA23_RS25250 () | 46216..46527 | + | 312 | WP_000558166.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| CGA23_RS25255 () | 46524..46970 | + | 447 | WP_001259012.1 | type II toxin-antitoxin system HigA family antitoxin | Antitoxin Detail |
| CGA23_RS25260 () | 46985..47926 | - | 942 | WP_001518251.1 | fatty acid biosynthesis protein FabY | - |
| CGA23_RS25265 () | 47971..48408 | - | 438 | WP_001621365.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
| CGA23_RS25270 () | 48405..49277 | - | 873 | WP_000921423.1 | virulence factor BrkB family protein | - |
| CGA23_RS25275 () | 49435..49677 | - | 243 | WP_001251454.1 | ogr/Delta-like zinc finger family protein | - |
| CGA23_RS25280 () | 49726..50844 | - | 1119 | WP_024153908.1 | phage late control D family protein | - |
| CGA23_RS25285 () | 51002..52195 | + | 1194 | WP_000224787.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CGA23_RS25290 () | 52208..52723 | + | 516 | WP_001207579.1 | phage major tail tube protein | - |
| CGA23_RS25295 () | 52738..53073 | + | 336 | WP_000047593.1 | hypothetical protein | - |
| CGA23_RS25300 () | 53082..53198 | + | 117 | WP_000763324.1 | GpE family phage tail protein | - |
| CGA23_RS25305 () | 53199..56126 | + | 2928 | WP_024153910.1 | phage tail tape measure protein | - |
| CGA23_RS25310 () | 56137..56586 | + | 450 | WP_024153911.1 | phage tail protein | - |
| CGA23_RS25315 () | 56791..57360 | - | 570 | WP_024153912.1 | tail fiber assembly protein | - |
| CGA23_RS25320 () | 57360..59096 | - | 1737 | WP_044144047.1 | phage tail protein | - |
| CGA23_RS25325 () | 59086..59699 | - | 614 | Protein_67 | phage tail protein I | - |
| CGA23_RS25330 () | 59692..60603 | - | 912 | WP_024153915.1 | baseplate assembly protein | - |
| CGA23_RS25335 () | 60600..60962 | - | 363 | WP_000108899.1 | GPW/gp25 family protein | - |
| CGA23_RS25340 () | 60959..61588 | - | 630 | WP_097361545.1 | phage baseplate assembly protein V | - |
| CGA23_RS25345 () | 61745..62386 | - | 642 | Protein_71 | phage virion morphogenesis protein | - |
| CGA23_RS25350 () | 62347..62841 | - | 495 | WP_000917105.1 | phage tail protein | - |
| CGA23_RS25355 () | 62841..63370 | - | 530 | Protein_73 | DUF2514 family protein | - |
| CGA23_RS25360 () | 63471..63910 | - | 440 | Protein_74 | glycoside hydrolase family protein | - |
| CGA23_RS25365 () | 63914..64227 | - | 314 | Protein_75 | phage holin, lambda family | - |
| CGA23_RS25370 () | 64238..64437 | - | 200 | Protein_76 | phage tail protein | - |
| CGA23_RS25375 () | 64451..64886 | - | 436 | Protein_77 | capsid assembly protein | - |
| CGA23_RS25380 () | 65023..65868 | - | 846 | Protein_78 | terminase | - |
| CGA23_RS25385 () | 65911..66955 | - | 1045 | Protein_79 | phage major capsid protein, P2 family | - |
| CGA23_RS25390 () | 66996..67840 | - | 845 | Protein_80 | phage capsid protein | - |
| CGA23_RS25395 () | 67994..69702 | + | 1709 | Protein_81 | oxidoreductase | - |
| CGA23_RS27300 () | 69699..69857 | - | 159 | WP_157762362.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|