MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 124481 bp
Accession: NZ_CP022600 Location: 1827133..1951613 Organism: Porphyrobacter sp. HT-58-2 Replicon: chromosome
Accession: NZ_CP022600 Location: 1827133..1951613 Organism: Porphyrobacter sp. HT-58-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHX26_RS08675 () | 1822774..1823739 | + | 966 | WP_104942024.1 | endolytic transglycosylase MltG | - |
| CHX26_RS08680 () | 1823746..1824276 | + | 531 | WP_104942025.1 | 2'-5' RNA ligase family protein | - |
| CHX26_RS08690 () | 1824645..1825898 | + | 1254 | WP_104942026.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CHX26_RS08695 () | 1826005..1827207 | - | 1203 | WP_104941947.1 | IS256 family transposase | - |
| CHX26_RS08700 () | 1827633..1828286 | - | 654 | WP_104943349.1 | lytic transglycosylase domain-containing protein | - |
| CHX26_RS08705 () | 1828408..1829337 | + | 930 | WP_104942027.1 | toprim domain-containing protein | - |
| CHX26_RS08710 () | 1829378..1833619 | + | 4242 | WP_104942028.1 | strawberry notch family protein | - |
| CHX26_RS08715 () | 1833673..1834086 | + | 414 | WP_104942029.1 | MbcA/ParS/Xre antitoxin family protein | - |
| CHX26_RS08720 () | 1834083..1834814 | + | 732 | WP_104942030.1 | RES family NAD+ phosphorylase | - |
| CHX26_RS08725 () | 1835127..1835384 | - | 258 | WP_104942031.1 | hypothetical protein | - |
| CHX26_RS15645 () | 1835547..1835729 | - | 183 | WP_146107686.1 | hypothetical protein | - |
| CHX26_RS08730 () | 1835726..1836349 | - | 624 | WP_104943350.1 | TetR/AcrR family transcriptional regulator | - |
| CHX26_RS08735 () | 1837045..1838265 | + | 1221 | WP_104942032.1 | L-amino acid dehydrogenase | VF |
| CHX26_RS08740 () | 1838588..1839739 | + | 1152 | WP_172449751.1 | diguanylate cyclase | - |
| CHX26_RS08745 () | 1839913..1840206 | + | 294 | WP_172449753.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CHX26_RS08750 () | 1840208..1840543 | + | 336 | WP_104942034.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CHX26_RS08755 () | 1840760..1842745 | - | 1986 | WP_104942035.1 | putative signaling protein | VF |
| CHX26_RS08760 () | 1842804..1843007 | - | 204 | WP_104942036.1 | hypothetical protein | - |
| CHX26_RS08765 () | 1843203..1843424 | + | 222 | WP_104942037.1 | hypothetical protein | - |
| CHX26_RS08770 () | 1843569..1844177 | + | 609 | WP_146107687.1 | hypothetical protein | - |
| CHX26_RS08775 () | 1844200..1844751 | + | 552 | WP_146107688.1 | hypothetical protein | - |
| CHX26_RS08780 () | 1844807..1845358 | + | 552 | WP_104942040.1 | hypothetical protein | - |
| CHX26_RS08785 () | 1845514..1846302 | + | 789 | WP_104942041.1 | molecular chaperone | - |
| CHX26_RS08790 () | 1846598..1849612 | + | 3015 | WP_172449755.1 | fimbria/pilus outer membrane usher protein | - |
| CHX26_RS08795 () | 1849609..1850514 | + | 906 | WP_146107689.1 | hypothetical protein | - |
| CHX26_RS15650 () | 1850511..1851182 | - | 672 | WP_146107690.1 | hypothetical protein | - |
| CHX26_RS08805 () | 1851584..1853572 | + | 1989 | WP_104942045.1 | ParB/RepB/Spo0J family partition protein | - |
| CHX26_RS08810 () | 1853741..1854682 | + | 942 | WP_104942046.1 | DUF1738 domain-containing protein | - |
| CHX26_RS08815 () | 1854694..1855116 | + | 423 | WP_104942047.1 | hypothetical protein | - |
| CHX26_RS08820 () | 1855424..1856368 | + | 945 | WP_104942048.1 | DUF2493 domain-containing protein | - |
| CHX26_RS08825 () | 1856482..1856940 | + | 459 | WP_104942049.1 | helix-turn-helix domain-containing protein | - |
| CHX26_RS08830 () | 1857612..1858001 | + | 390 | WP_104942050.1 | single-stranded DNA-binding protein | - |
| CHX26_RS08835 () | 1858106..1858336 | - | 231 | WP_104942051.1 | hypothetical protein | - |
| CHX26_RS08840 () | 1858662..1858898 | + | 237 | WP_104942052.1 | hypothetical protein | - |
| CHX26_RS08845 () | 1859520..1862726 | + | 3207 | WP_104942053.1 | type II CRISPR RNA-guided endonuclease Cas9 | - |
| CHX26_RS08855 () | 1863768..1864070 | + | 303 | WP_104942055.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CHX26_RS08865 () | 1864724..1865056 | + | 333 | WP_104942057.1 | hypothetical protein | - |
| CHX26_RS08870 () | 1865046..1867529 | + | 2484 | WP_104942058.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CHX26_RS08875 () | 1867567..1870491 | + | 2925 | WP_104942059.1 | conjugative relaxase | - |
| CHX26_RS08885 () | 1871649..1872065 | - | 417 | WP_104942061.1 | type II toxin-antitoxin system VapC family toxin | - |
| CHX26_RS08895 () | 1872654..1873535 | + | 882 | WP_146107691.1 | IS1595 family transposase | - |
| CHX26_RS08900 () | 1873567..1874481 | + | 915 | WP_172449757.1 | IS1595 family transposase ISNwi2 | Transposase |
| CHX26_RS08905 () | 1874589..1875725 | - | 1137 | WP_104942065.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| CHX26_RS08910 () | 1875722..1877026 | - | 1305 | WP_104942066.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| CHX26_RS08915 () | 1877468..1878112 | - | 645 | WP_104942067.1 | helix-turn-helix transcriptional regulator | - |
| CHX26_RS08925 () | 1878736..1880283 | - | 1548 | WP_104943351.1 | DUF11 domain-containing protein | - |
| CHX26_RS08930 () | 1880854..1885950 | - | 5097 | WP_104943352.1 | DUF11 domain-containing protein | - |
| CHX26_RS08935 () | 1886018..1887070 | - | 1053 | WP_104940614.1 | DUF11 domain-containing protein | - |
| CHX26_RS08940 () | 1887142..1887624 | - | 483 | WP_104942069.1 | hypothetical protein | - |
| CHX26_RS08945 () | 1887680..1888675 | - | 996 | WP_104942070.1 | hypothetical protein | - |
| CHX26_RS08950 () | 1888992..1889219 | - | 228 | WP_104942071.1 | hypothetical protein | - |
| CHX26_RS08960 () | 1889759..1891696 | + | 1938 | WP_172449759.1 | EAL domain-containing protein | - |
| CHX26_RS08965 () | 1891744..1892205 | - | 462 | WP_104942074.1 | hypothetical protein | - |
| CHX26_RS08975 () | 1894382..1895110 | - | 729 | WP_104942076.1 | hypothetical protein | - |
| CHX26_RS08980 () | 1895308..1895748 | + | 441 | WP_146107692.1 | LysR family transcriptional regulator | - |
| CHX26_RS08985 () | 1896119..1896973 | - | 855 | WP_104942078.1 | NAD(P)-dependent oxidoreductase | - |
| CHX26_RS08990 () | 1897789..1898124 | - | 336 | WP_146107693.1 | hypothetical protein | - |
| CHX26_RS15885 () | 1898373..1898546 | - | 174 | WP_172449761.1 | hypothetical protein | - |
| CHX26_RS08995 () | 1898811..1899431 | + | 621 | WP_104942080.1 | Transcriptional regulatory protein FixJ | VF |
| CHX26_RS09000 () | 1899560..1899781 | + | 222 | WP_104942081.1 | hypothetical protein | - |
| CHX26_RS15655 () | 1900471..1900701 | + | 231 | WP_172449763.1 | hypothetical protein | - |
| CHX26_RS09005 () | 1902173..1902397 | + | 225 | WP_104942082.1 | hypothetical protein | - |
| CHX26_RS09010 () | 1902601..1902939 | + | 339 | WP_104942083.1 | hypothetical protein | - |
| CHX26_RS09015 () | 1903173..1904309 | - | 1137 | WP_104943353.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| CHX26_RS09020 () | 1904630..1905154 | - | 525 | WP_104942084.1 | transcriptional activator RfaH | - |
| CHX26_RS09025 () | 1905501..1905884 | + | 384 | WP_104942085.1 | MarR family EPS-associated transcriptional regulator | - |
| CHX26_RS15660 () | 1906018..1906215 | + | 198 | WP_146107695.1 | hypothetical protein | - |
| CHX26_RS09030 () | 1906242..1908077 | + | 1836 | WP_104942086.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| CHX26_RS15665 () | 1908465..1909412 | + | 948 | WP_146107696.1 | hypothetical protein | - |
| CHX26_RS09035 () | 1909414..1910145 | + | 732 | WP_104942087.1 | class I SAM-dependent methyltransferase | - |
| CHX26_RS09040 () | 1910256..1911077 | - | 822 | WP_104942088.1 | IS5 family transposase ISEc61 | Transposase |
| CHX26_RS09045 () | 1911228..1912373 | + | 1146 | Protein_1804 | IS3 family transposase | - |
| CHX26_RS09050 () | 1912513..1913517 | + | 1005 | WP_104942089.1 | glycosyltransferase | - |
| CHX26_RS15670 () | 1913505..1914752 | + | 1248 | WP_146107697.1 | hypothetical protein | - |
| CHX26_RS09055 () | 1915214..1915999 | + | 786 | WP_104942090.1 | IS5 family transposase ISEc61 | Transposase |
| CHX26_RS09060 () | 1916374..1917408 | + | 1035 | WP_104942091.1 | UDP-glucose 4-epimerase | VF |
| CHX26_RS09065 () | 1917405..1918526 | + | 1122 | WP_104942092.1 | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase | VF |
| CHX26_RS09070 () | 1918523..1919677 | + | 1155 | WP_104942093.1 | UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase | VF |
| CHX26_RS09075 () | 1919674..1920948 | + | 1275 | WP_104942094.1 | glycosyltransferase family 4 protein | - |
| CHX26_RS09080 () | 1920945..1921538 | + | 594 | WP_104942095.1 | putative sugar transferase EpsL | VF |
| CHX26_RS09085 () | 1921535..1922182 | + | 648 | WP_104942096.1 | NeuD/PglB/VioB family sugar acetyltransferase | - |
| CHX26_RS09090 () | 1922184..1923476 | + | 1293 | WP_104942097.1 | GDP-perosamine synthase | VF |
| CHX26_RS15675 () | 1923484..1923597 | - | 114 | WP_199797822.1 | transposase domain-containing protein | - |
| CHX26_RS09095 () | 1923716..1923817 | - | 102 | Protein_1816 | IS3 family transposase ISPfe1 | Transposase |
| CHX26_RS09100 () | 1923956..1924297 | - | 342 | WP_066772473.1 | IS66 family transposase ISAzs20 | Transposase |
| CHX26_RS09105 () | 1924294..1924638 | - | 345 | WP_104943354.1 | IS66 family transposase ISAzca2 | Transposase |
| CHX26_RS09110 () | 1924635..1926113 | - | 1479 | Protein_1819 | IS66 family transposase | - |
| CHX26_RS09115 () | 1926242..1927483 | + | 1242 | WP_104941289.1 | IS21 family transposase ISBcen28 | Transposase |
| CHX26_RS09120 () | 1927480..1928325 | + | 846 | WP_104941290.1 | IS21 family transposase ISRel3 | Transposase |
| CHX26_RS09125 () | 1928516..1928872 | - | 357 | WP_104942098.1 | IS66 family transposase ISNisp6 | Transposase |
| CHX26_RS09130 () | 1928869..1929297 | - | 429 | WP_104942099.1 | IS66 family transposase ISAzca2 | Transposase |
| CHX26_RS15680 () | 1929575..1929697 | - | 123 | WP_146107698.1 | IS3 family transposase ISSst1 | Transposase |
| CHX26_RS09135 () | 1929841..1931844 | - | 2004 | WP_199797823.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| CHX26_RS09140 () | 1931883..1932524 | - | 642 | WP_146107699.1 | tyrosine-type recombinase/integrase | - |
| CHX26_RS09145 () | 1932576..1933778 | + | 1203 | WP_104941947.1 | IS256 family transposase ISAli6 | Transposase |
| CHX26_RS09150 () | 1933750..1934166 | - | 417 | WP_104942101.1 | hypothetical protein ; Integrase | Integrase |
| CHX26_RS09155 () | 1934344..1935897 | + | 1554 | WP_104942102.1 | O-antigen ligase family protein | - |
| CHX26_RS09160 () | 1935985..1936689 | + | 705 | WP_104942103.1 | hypothetical protein | VF |
| CHX26_RS09165 () | 1936697..1938832 | + | 2136 | WP_104942104.1 | Putative tyrosine-protein kinase in cps region | VF |
| CHX26_RS09170 () | 1938874..1940094 | + | 1221 | WP_104942105.1 | hypothetical protein | - |
| CHX26_RS09175 () | 1940492..1940758 | - | 267 | WP_104942106.1 | MarR family transcriptional regulator | - |
| CHX26_RS09180 () | 1940950..1941282 | - | 333 | WP_172449765.1 | JAB domain-containing protein | - |
| CHX26_RS15890 () | 1942986..1943153 | - | 168 | WP_172449767.1 | hypothetical protein | - |
| CHX26_RS09195 () | 1943699..1944187 | + | 489 | WP_104942109.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| CHX26_RS09200 () | 1944480..1947185 | - | 2706 | WP_104942110.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CHX26_RS09205 () | 1947215..1948630 | - | 1416 | WP_172449905.1 | conjugal transfer protein TraH | - |
| CHX26_RS09210 () | 1948698..1949522 | - | 825 | WP_104942111.1 | conjugal transfer protein TraF | - |
| CHX26_RS09215 () | 1949509..1951197 | - | 1689 | WP_104943357.1 | conjugal transfer protein TraN | - |
| CHX26_RS09220 () | 1951239..1952003 | - | 765 | WP_104942112.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CHX26_RS09225 () | 1952000..1953016 | - | 1017 | WP_172449769.1 | TraU family protein | - |
| CHX26_RS09230 () | 1953013..1953621 | - | 609 | WP_104943358.1 | type-F conjugative transfer system protein TraW | - |
| CHX26_RS09235 () | 1953648..1954172 | - | 525 | WP_104942114.1 | S26 family signal peptidase | - |
| CHX26_RS09240 () | 1954159..1954647 | - | 489 | Protein_1846 | TrbI F-type domain-containing protein | - |
| CHX26_RS09245 () | 1954644..1955051 | - | 408 | WP_104942115.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|