MGE detailed information
MGE type: Genomic_island MGE length: 19603 bp
Accession: NZ_CP022548 Location: 336214..355816 Organism: Sphingorhabdus sp. YGSMI21 Replicon: chromosome
Accession: NZ_CP022548 Location: 336214..355816 Organism: Sphingorhabdus sp. YGSMI21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHN51_RS01560 () | 331356..331994 | + | 639 | WP_100092440.1 | TetR family transcriptional regulator | - |
| CHN51_RS01565 () | 331991..332521 | - | 531 | WP_100092441.1 | VOC family protein | - |
| CHN51_RS01570 () | 332518..333171 | - | 654 | WP_100092442.1 | carboxymuconolactone decarboxylase family protein | - |
| CHN51_RS01575 () | 333219..335900 | - | 2682 | WP_100092443.1 | aconitate hydratase AcnA | - |
| CHN51_RS01580 () | 336214..337167 | + | 954 | WP_123906211.1 | hypothetical protein | - |
| CHN51_RS01585 () | 337167..337748 | + | 582 | WP_100092445.1 | hypothetical protein | - |
| CHN51_RS01590 () | 337794..338474 | + | 681 | WP_123906212.1 | hypothetical protein | - |
| CHN51_RS19465 () | 338504..338815 | + | 312 | WP_123906213.1 | hypothetical protein | - |
| CHN51_RS01595 () | 338997..339275 | - | 279 | WP_100092447.1 | hypothetical protein | - |
| CHN51_RS01600 () | 339607..340320 | + | 714 | WP_123906214.1 | hypothetical protein | - |
| CHN51_RS01605 () | 340731..341489 | - | 759 | WP_100092449.1 | competence/damage-inducible protein A | - |
| CHN51_RS01610 () | 341530..343284 | - | 1755 | WP_164088946.1 | sulfatase-like hydrolase/transferase | - |
| CHN51_RS01615 () | 343407..344231 | + | 825 | WP_100092451.1 | type I methionyl aminopeptidase | - |
| CHN51_RS01620 () | 344349..345518 | - | 1170 | WP_100092452.1 | DUF4263 domain-containing protein | - |
| CHN51_RS01625 () | 345813..346721 | + | 909 | WP_100092453.1 | hypothetical protein | - |
| CHN51_RS01630 () | 346800..347084 | - | 285 | WP_100092454.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CHN51_RS01635 () | 347077..347325 | - | 249 | WP_100092455.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CHN51_RS01640 () | 347481..347819 | + | 339 | WP_100092456.1 | hypothetical protein | - |
| CHN51_RS01645 () | 347890..348738 | - | 849 | WP_100095364.1 | hypothetical protein | VF |
| CHN51_RS01650 () | 349105..350193 | + | 1089 | WP_100095365.1 | GAF domain-containing protein | - |
| CHN51_RS01655 () | 350313..352436 | + | 2124 | WP_100092457.1 | PQQ-dependent dehydrogenase, methanol/ethanol family | - |
| CHN51_RS01660 () | 352674..353012 | + | 339 | WP_100092458.1 | P-II family nitrogen regulator | - |
| CHN51_RS01665 () | 353060..354472 | + | 1413 | WP_100092459.1 | type I glutamate--ammonia ligase | - |
| CHN51_RS01670 () | 354757..355200 | + | 444 | WP_100092460.1 | hypothetical protein | - |
| CHN51_RS01675 () | 355340..355816 | + | 477 | WP_100092461.1 | hypothetical protein | - |
| CHN51_RS01680 () | 355990..360159 | - | 4170 | WP_100092462.1 | translocation/assembly module TamB domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|