MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 83647 bp
Accession: NZ_CP022478 Location: 4249539..4333185 Organism: Pseudomonas aeruginosa strain LW Replicon: chromosome
Accession: NZ_CP022478 Location: 4249539..4333185 Organism: Pseudomonas aeruginosa strain LW Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEK59_RS20130 () | 4245162..4249307 | + | 4146 | WP_058161072.1 | two-partner secretion system exoprotein TpsA4 | - |
| CEK59_RS20135 () | 4249676..4250542 | + | 867 | WP_003120956.1 | ParA family protein | - |
| CEK59_RS20140 () | 4250544..4251281 | + | 738 | WP_023108754.1 | hypothetical protein | - |
| CEK59_RS20145 () | 4251278..4251775 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| CEK59_RS20150 () | 4251781..4252233 | + | 453 | Protein_3884 | hypothetical protein | - |
| CEK59_RS20155 () | 4252294..4252923 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| CEK59_RS20160 () | 4252923..4253624 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| CEK59_RS20165 () | 4253621..4254328 | + | 708 | WP_023082649.1 | HNH endonuclease | - |
| CEK59_RS20170 () | 4254312..4254536 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| CEK59_RS20175 () | 4254533..4255876 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| CEK59_RS20180 () | 4255933..4256553 | + | 621 | WP_127891085.1 | hypothetical protein | - |
| CEK59_RS20185 () | 4256648..4257235 | + | 588 | WP_023093612.1 | hypothetical protein | - |
| CEK59_RS20190 () | 4258366..4258803 | - | 438 | WP_023093613.1 | hypothetical protein | - |
| CEK59_RS20200 () | 4259393..4259818 | - | 426 | WP_031633320.1 | hypothetical protein | - |
| CEK59_RS20205 () | 4259996..4260181 | + | 186 | WP_023102676.1 | hypothetical protein | - |
| CEK59_RS20210 () | 4260171..4260698 | + | 528 | WP_023102677.1 | hypothetical protein | - |
| CEK59_RS20215 () | 4260695..4260952 | + | 258 | WP_023093616.1 | hypothetical protein | - |
| CEK59_RS20220 () | 4260945..4261439 | + | 495 | WP_124128445.1 | hypothetical protein | - |
| CEK59_RS20225 () | 4261432..4261665 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| CEK59_RS20230 () | 4261665..4262687 | + | 1023 | WP_127891086.1 | nucleoid-associated protein YejK | - |
| CEK59_RS20235 () | 4262684..4263574 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| CEK59_RS20240 () | 4263595..4263864 | + | 270 | WP_127891087.1 | Arc family DNA-binding protein | - |
| CEK59_RS20245 () | 4263861..4265594 | + | 1734 | WP_031637209.1 | ParB family protein | - |
| CEK59_RS20250 () | 4265622..4266377 | + | 756 | WP_012076849.1 | DUF2857 domain-containing protein | - |
| CEK59_RS20255 () | 4266380..4267705 | + | 1326 | WP_031637207.1 | hypothetical protein | - |
| CEK59_RS20260 () | 4268530..4269105 | + | 576 | WP_127891116.1 | hypothetical protein | - |
| CEK59_RS20270 () | 4269371..4270099 | + | 729 | WP_023082037.1 | TIGR03761 family integrating conjugative element protein | - |
| CEK59_RS20275 () | 4270105..4270653 | + | 549 | WP_034057507.1 | DUF3158 family protein | - |
| CEK59_RS20280 () | 4270701..4271531 | + | 831 | WP_003120975.1 | Rha family transcriptional regulator | - |
| CEK59_RS20285 () | 4271561..4272049 | + | 489 | WP_010792225.1 | single-stranded DNA-binding protein | - |
| CEK59_RS20290 () | 4272157..4272510 | + | 354 | WP_003120979.1 | helix-turn-helix domain-containing protein | - |
| CEK59_RS20295 () | 4272630..4272797 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| CEK59_RS20300 () | 4272912..4274831 | + | 1920 | WP_023082041.1 | type I DNA topoisomerase | - |
| CEK59_RS20305 () | 4274839..4275591 | + | 753 | WP_023082042.1 | hypothetical protein | - |
| CEK59_RS20310 () | 4275892..4277781 | + | 1890 | WP_023101908.1 | hypothetical protein | - |
| CEK59_RS20315 () | 4277778..4279754 | + | 1977 | WP_031691363.1 | DEAD/DEAH box helicase | - |
| CEK59_RS20320 () | 4279893..4280237 | + | 345 | WP_023082045.1 | hypothetical protein | - |
| CEK59_RS20325 () | 4280308..4280598 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| CEK59_RS20330 () | 4280595..4280894 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CEK59_RS20335 () | 4281096..4282220 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| CEK59_RS20340 () | 4282220..4283929 | + | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| CEK59_RS20345 () | 4283933..4285258 | + | 1326 | WP_126160157.1 | type 4b pilus protein PilO2 | - |
| CEK59_RS20350 () | 4285248..4285781 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| CEK59_RS20355 () | 4285790..4287370 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CEK59_RS20360 () | 4287370..4288449 | + | 1080 | WP_023093858.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CEK59_RS20365 () | 4288471..4289001 | + | 531 | WP_023093859.1 | hypothetical protein | VF |
| CEK59_RS20370 () | 4288998..4289954 | + | 957 | WP_023093675.1 | Flp pilus assembly complex ATPase component TadA | - |
| CEK59_RS20375 () | 4289947..4291326 | + | 1380 | WP_023093860.1 | hypothetical protein | VF |
| CEK59_RS20380 () | 4291344..4291781 | + | 438 | WP_023093861.1 | hypothetical protein | VF |
| CEK59_RS20390 () | 4292780..4293766 | + | 987 | WP_003099775.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CEK59_RS20400 () | 4294079..4294645 | + | 567 | WP_003099777.1 | hypothetical protein | - |
| CEK59_RS20405 () | 4294722..4294901 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| CEK59_RS20410 () | 4295360..4295848 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| CEK59_RS32530 () | 4295986..4296144 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| CEK59_RS20415 () | 4296218..4296415 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| CEK59_RS20420 () | 4296607..4297320 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| CEK59_RS20425 () | 4297556..4297906 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| CEK59_RS20430 () | 4297963..4298595 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| CEK59_RS20435 () | 4298592..4298867 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| CEK59_RS20440 () | 4298937..4299299 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| CEK59_RS20445 () | 4299367..4299627 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| CEK59_RS20450 () | 4299720..4300325 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| CEK59_RS20455 () | 4300355..4301800 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| CEK59_RS20460 () | 4301905..4304154 | + | 2250 | WP_114012966.1 | DEAD/DEAH box helicase | - |
| CEK59_RS20465 () | 4304475..4304729 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| CEK59_RS20480 () | 4305370..4305567 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| CEK59_RS20485 () | 4305785..4306477 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| CEK59_RS20490 () | 4306488..4307240 | + | 753 | WP_058007452.1 | TIGR03759 family integrating conjugative element protein | - |
| CEK59_RS20495 () | 4307225..4307806 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| CEK59_RS20500 () | 4307803..4308303 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| CEK59_RS20505 () | 4308375..4308581 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| CEK59_RS20510 () | 4308585..4310816 | + | 2232 | WP_023082676.1 | type IV conjugative transfer system coupling protein TraD | - |
| CEK59_RS20515 () | 4310816..4311562 | + | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CEK59_RS20520 () | 4311580..4312071 | + | 492 | WP_023980742.1 | hypothetical protein | - |
| CEK59_RS20525 () | 4312312..4313793 | + | 1482 | WP_126869412.1 | UvrD-helicase domain-containing protein | - |
| CEK59_RS20530 () | 4313902..4314207 | + | 306 | WP_003141510.1 | hypothetical protein | - |
| CEK59_RS20535 () | 4314301..4314639 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| CEK59_RS20540 () | 4314636..4314875 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| CEK59_RS20545 () | 4314893..4315249 | + | 357 | WP_049243255.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CEK59_RS20550 () | 4315260..4315646 | + | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| CEK59_RS20555 () | 4315643..4316302 | + | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| CEK59_RS20560 () | 4316299..4317183 | + | 885 | WP_127891088.1 | TIGR03749 family integrating conjugative element protein | - |
| CEK59_RS20565 () | 4317167..4318672 | + | 1506 | WP_127891089.1 | TIGR03752 family integrating conjugative element protein | - |
| CEK59_RS20570 () | 4318650..4319093 | + | 444 | WP_127891090.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CEK59_RS20575 () | 4319093..4322035 | + | 2943 | WP_127891091.1 | conjugative transfer ATPase | - |
| CEK59_RS20580 () | 4322032..4322316 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| CEK59_RS20585 () | 4322313..4322972 | + | 660 | WP_021205800.1 | DsbA family protein | - |
| CEK59_RS20590 () | 4322969..4323187 | - | 219 | WP_043153134.1 | hypothetical protein | - |
| CEK59_RS20595 () | 4323396..4323827 | + | 432 | WP_079457541.1 | TIGR03757 family integrating conjugative element protein | - |
| CEK59_RS20600 () | 4323827..4324765 | + | 939 | WP_127891092.1 | TIGR03756 family integrating conjugative element protein | - |
| CEK59_RS20605 () | 4324783..4326165 | + | 1383 | WP_116829785.1 | integrating conjugative element protein | - |
| CEK59_RS20610 () | 4326165..4326521 | + | 357 | WP_023110950.1 | hypothetical protein | - |
| CEK59_RS20615 () | 4326518..4328062 | + | 1545 | WP_023110951.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CEK59_RS20620 () | 4328097..4328447 | - | 351 | WP_023110952.1 | DUF3742 family protein | - |
| CEK59_RS20625 () | 4328566..4328838 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CEK59_RS20630 () | 4328842..4329192 | + | 351 | WP_003117088.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CEK59_RS20635 () | 4329521..4331440 | + | 1920 | WP_023110953.1 | helicase/relaxase domain-containing protein | - |
| CEK59_RS20640 () | 4331437..4332786 | + | 1350 | WP_012076887.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CEK59_RS20660 () | 4333623..4336187 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| CEK59_RS20665 () | 4336343..4337071 | - | 729 | WP_023435616.1 | peptidoglycan editing factor PgeF | - |
| CEK59_RS20670 () | 4337068..4338030 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|