MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NZ_CP022457 Location: 2315455..2328842 Organism: Shigella sonnei strain 2015C-3566 Replicon: chromosome
Accession: NZ_CP022457 Location: 2315455..2328842 Organism: Shigella sonnei strain 2015C-3566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9128_RS12505 (2310524) | 2310524..2314732 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| B9128_RS12510 (2314744) | 2314744..2315193 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| B9128_RS12515 (2315455) | 2315455..2316591 | + | 1137 | Protein_2231 | ISAs1 family transposase ISEc1 | Transposase |
| B9128_RS12520 (2316629) | 2316629..2317039 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| B9128_RS12525 (2317039) | 2317039..2317416 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| B9128_RS12530 (2317885) | 2317885..2319021 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| B9128_RS12535 (2319063) | 2319063..2319833 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| B9128_RS12540 (2320014) | 2320014..2320460 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| B9128_RS12545 (2320503) | 2320503..2322947 | - | 2445 | WP_000973074.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| B9128_RS12550 (2323187) | 2323187..2323765 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| B9128_RS12555 (2323971) | 2323971..2324738 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| B9128_RS12560 (2324709) | 2324709..2325449 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| B9128_RS12565 (2325605) | 2325605..2325883 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| B9128_RS12570 (2325886) | 2325886..2326146 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| B9128_RS12575 (2326332) | 2326332..2327105 | + | 774 | Protein_2243 | hypothetical protein | VF |
| B9128_RS27410 (2328146) | 2328146..2328274 | + | 129 | Protein_2245 | ISAs1 family transposase | - |
| B9128_RS12590 (2328345) | 2328345..2328842 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| B9128_RS12595 (2328965) | 2328965..2330677 | - | 1713 | Protein_2247 | flagellar biosynthesis protein FlhA | - |
| B9128_RS12600 (2330649) | 2330649..2331434 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| B9128_RS12605 (2331505) | 2331505..2332560 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| B9128_RS12610 (2332557) | 2332557..2333009 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| B9128_RS12620 (2333255) | 2333255..2333776 | + | 522 | Protein_2251 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|