MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NZ_CP022455 Location: 4112621..4126008 Organism: Shigella sonnei strain 2015C-3794 Replicon: chromosome
Accession: NZ_CP022455 Location: 4112621..4126008 Organism: Shigella sonnei strain 2015C-3794 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9129_RS22630 (4107690) | 4107690..4111898 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| B9129_RS22635 (4111910) | 4111910..4112359 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| B9129_RS22640 (4112621) | 4112621..4113757 | + | 1137 | Protein_4060 | ISAs1 family transposase ISEc1 | Transposase |
| B9129_RS22645 (4113795) | 4113795..4114205 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| B9129_RS22650 (4114205) | 4114205..4114582 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| B9129_RS22655 (4115051) | 4115051..4116187 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| B9129_RS22660 (4116229) | 4116229..4116999 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| B9129_RS22665 (4117180) | 4117180..4117626 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| B9129_RS22670 (4117669) | 4117669..4120113 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| B9129_RS22675 (4120353) | 4120353..4120931 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| B9129_RS22680 (4121137) | 4121137..4121904 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| B9129_RS22685 (4121875) | 4121875..4122615 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| B9129_RS22690 (4122771) | 4122771..4123049 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| B9129_RS22695 (4123052) | 4123052..4123312 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| B9129_RS22700 (4123498) | 4123498..4124271 | + | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| B9129_RS27330 (4125312) | 4125312..4125440 | + | 129 | Protein_4074 | ISAs1 family transposase | - |
| B9129_RS22715 (4125511) | 4125511..4126008 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| B9129_RS22720 (4126131) | 4126131..4127843 | - | 1713 | Protein_4076 | flagellar biosynthesis protein FlhA | - |
| B9129_RS22725 (4127815) | 4127815..4128600 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| B9129_RS22730 (4128671) | 4128671..4129726 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| B9129_RS22735 (4129723) | 4129723..4130175 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| B9129_RS22745 (4130421) | 4130421..4130942 | + | 522 | Protein_4080 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|