MGE detailed information
MGE type: Prophage MGE length: 35342 bp
Accession: NZ_CP022455 Location: 369150..404491 Organism: Shigella sonnei strain 2015C-3794 Replicon: chromosome
Accession: NZ_CP022455 Location: 369150..404491 Organism: Shigella sonnei strain 2015C-3794 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9129_RS02195 () | 365233..365874 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| B9129_RS02200 () | 365930..367108 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| B9129_RS02205 () | 367242..367532 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| B9129_RS02210 () | 367599..367955 | + | 357 | WP_001295500.1 | protein YebF | - |
| B9129_RS02215 () | 368282..368941 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| B9129_RS02220 () | 369150..371210 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| B9129_RS02225 () | 371207..371869 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| B9129_RS02230 () | 371893..372549 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| B9129_RS02235 () | 372651..372881 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| B9129_RS02240 () | 373020..373394 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| B9129_RS02245 () | 373398..374270 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| B9129_RS02250 () | 374283..374624 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 374652..374886 | - | 235 | - | - | Antitoxin Detail |
| - | 374782..374885 | + | 104 | - | - | Toxin Detail |
| B9129_RS02255 () | 375017..376093 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| B9129_RS02260 () | 376130..376375 | - | 246 | Protein_398 | IS1 family transposase IS1R | Transposase |
| B9129_RS02275 () | 377756..378511 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| B9129_RS02280 () | 378528..380063 | - | 1536 | WP_000447022.1 | IS21 family transposase ISSso4 | Transposase |
| B9129_RS02285 () | 380350..380807 | - | 458 | Protein_402 | IS1-like element IS1A family transposase | - |
| B9129_RS02290 () | 380836..381096 | - | 261 | WP_077447296.1 | excisionase | - |
| B9129_RS02295 () | 381241..382397 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| B9129_RS02305 () | 382513..384228 | - | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| B9129_RS02320 () | 386237..386410 | + | 174 | Protein_407 | metallophosphoesterase | - |
| B9129_RS02340 () | 387176..387481 | + | 306 | Protein_409 | serine/threonine-protein phosphatase | - |
| B9129_RS02345 () | 387539..388695 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| B9129_RS02350 () | 388737..388937 | + | 201 | Protein_411 | serine/threonine-protein phosphatase | - |
| B9129_RS02355 () | 388938..389129 | - | 192 | WP_001296140.1 | YebW family protein | - |
| B9129_RS02360 () | 389234..389392 | - | 159 | Protein_413 | YebV family protein | - |
| B9129_RS02370 () | 389450..390147 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| B9129_RS27425 () | 390164..390247 | - | 84 | Protein_415 | DUF1480 family protein | - |
| B9129_RS02375 () | 390365..391804 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| B9129_RS02380 () | 391885..394518 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| B9129_RS02385 () | 394487..395770 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| B9129_RS02390 () | 395900..396397 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| B9129_RS02395 () | 396494..397192 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| B9129_RS02400 () | 397212..399260 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| B9129_RS02405 () | 399452..400333 | + | 882 | WP_000984517.1 | protease HtpX | - |
| B9129_RS02410 () | 400379..401442 | - | 1064 | Protein_423 | MFS transporter | - |
| B9129_RS02415 () | 401619..402410 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| B9129_RS02420 () | 402553..402792 | - | 240 | WP_001211011.1 | YobH family protein | - |
| B9129_RS02425 () | 402951..403094 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| B9129_RS02430 () | 403169..403456 | + | 288 | WP_001006860.1 | YebO family protein | - |
| B9129_RS02440 () | 404126..404269 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| B9129_RS02445 () | 404282..404491 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| B9129_RS02450 () | 404657..405466 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| B9129_RS02455 () | 405463..406029 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| B9129_RS02465 () | 406458..406916 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| B9129_RS02470 () | 406971..407821 | - | 851 | Protein_433 | PTS mannose transporter subunit IID | - |
| B9129_RS02475 () | 407834..408634 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|