MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60860 bp
Accession: NZ_CP022452 Location: 1..60860 Organism: Salmonella enterica subsp. enterica serovar Indiana strain D90 Replicon: plasmid pD90-2
Accession: NZ_CP022452 Location: 1..60860 Organism: Salmonella enterica subsp. enterica serovar Indiana strain D90 Replicon: plasmid pD90-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGL53_RS25640 () | 108..449 | + | 342 | WP_000730722.1 | plasmid mobilization relaxosome protein MobC | - |
| CGL53_RS25645 () | 446..4759 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| CGL53_RS25650 () | 4980..6605 | + | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | - |
| CGL53_RS25655 () | 6677..7450 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| CGL53_RS26625 () | 7409..7849 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| CGL53_RS25665 () | 8195..8401 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| CGL53_RS25670 () | 8470..10635 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| CGL53_RS25675 () | 10640..11215 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| CGL53_RS25680 () | 11385..13061 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| CGL53_RS25685 () | 13156..13671 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| CGL53_RS25690 () | 13718..14371 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| CGL53_RS25695 () | 14383..15507 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| CGL53_RS26720 () | 16439..16603 | - | 165 | WP_172840589.1 | hypothetical protein | - |
| CGL53_RS26725 () | 16842..17050 | + | 209 | Protein_13 | prepilin | - |
| CGL53_RS25720 () | 17047..18405 | - | 1359 | Protein_14 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CGL53_RS25725 () | 18418..19053 | - | 636 | WP_000934977.1 | A24 family peptidase | - |
| CGL53_RS25730 () | 19057..19539 | - | 483 | WP_001258095.1 | lytic transglycosylase domain-containing protein | - |
| CGL53_RS25735 () | 19605..20168 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| CGL53_RS25740 () | 20218..21327 | - | 1110 | WP_000974903.1 | type II secretion system F family protein | - |
| CGL53_RS25745 () | 21318..22856 | - | 1539 | WP_000466225.1 | Flp pilus assembly complex ATPase component TadA | - |
| CGL53_RS25750 () | 22881..23375 | - | 495 | WP_000912553.1 | type IV pilus biogenesis protein PilP | - |
| CGL53_RS25755 () | 23359..24681 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| CGL53_RS25760 () | 24720..26363 | - | 1644 | WP_001035592.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CGL53_RS25765 () | 26356..26892 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| CGL53_RS25770 () | 26939..28897 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CGL53_RS25775 () | 28914..29969 | - | 1056 | WP_001542006.1 | P-type DNA transfer ATPase VirB11 | - |
| CGL53_RS25780 () | 29998..31128 | - | 1131 | WP_172840590.1 | TrbI/VirB10 family protein | - |
| CGL53_RS25785 () | 31118..31820 | - | 703 | Protein_27 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CGL53_RS25790 () | 31886..32620 | - | 735 | WP_000432282.1 | type IV secretion system protein | - |
| CGL53_RS25795 () | 32620..32754 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| CGL53_RS25800 () | 32786..35144 | - | 2359 | Protein_30 | conjugal transfer protein | - |
| CGL53_RS25805 () | 35150..35470 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| CGL53_RS25810 () | 35541..35729 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| CGL53_RS25815 () | 35831..36415 | - | 585 | WP_001177117.1 | lytic transglycosylase domain-containing protein | - |
| CGL53_RS25820 () | 36436..36834 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| CGL53_RS25825 () | 36953..37390 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| CGL53_RS25830 () | 37396..38631 | - | 1236 | WP_034169417.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| CGL53_RS25835 () | 38634..38933 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| CGL53_RS25840 () | 38981..39790 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| CGL53_RS25845 () | 40013..40237 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| CGL53_RS25850 () | 40246..40890 | - | 645 | WP_001310442.1 | conjugal transfer protein TrbJ | - |
| CGL53_RS25855 () | 40896..41891 | - | 996 | WP_001028540.1 | type IV secretion system protein | - |
| CGL53_RS25860 () | 41895..42152 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| CGL53_RS25865 () | 42149..42451 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| CGL53_RS25870 () | 42432..42689 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| CGL53_RS25875 () | 42722..43168 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| CGL53_RS26730 () | 43179..43349 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| CGL53_RS25880 () | 43353..43796 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| CGL53_RS25890 () | 44170..45123 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| CGL53_RS26735 () | 45150..45326 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| CGL53_RS25895 () | 45319..45534 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| CGL53_RS25900 () | 45527..46033 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| CGL53_RS25905 () | 47111..48139 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| CGL53_RS25930 () | 49738..49899 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| CGL53_RS25935 () | 50049..50645 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| CGL53_RS25940 () | 50663..50833 | - | 171 | WP_000186151.1 | hypothetical protein | - |
| CGL53_RS25945 () | 51021..51686 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| CGL53_RS25955 () | 52275..52604 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| CGL53_RS25960 () | 53005..53520 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| CGL53_RS25965 () | 53624..54166 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| CGL53_RS25970 () | 54163..54417 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| CGL53_RS25975 () | 54414..54656 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| CGL53_RS25985 () | 55227..55520 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| CGL53_RS25990 () | 56009..56257 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CGL53_RS25995 () | 56254..56601 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CGL53_RS26000 () | 56689..56871 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| CGL53_RS26005 () | 57373..57672 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CGL53_RS26010 () | 57932..58258 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| CGL53_RS26015 () | 58260..58619 | - | 360 | WP_024147837.1 | hypothetical protein | - |
| CGL53_RS26020 () | 58720..59427 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| CGL53_RS26025 () | 59429..60181 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| CGL53_RS26030 () | 60199..60600 | - | 402 | WP_021575837.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|