MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92794 bp
Accession: NZ_CP022422 Location: 1..92794 Organism: Sulfitobacter pseudonitzschiae strain SMR1 Replicon: plasmid pSMR1-7
Accession: NZ_CP022422 Location: 1..92794 Organism: Sulfitobacter pseudonitzschiae strain SMR1 Replicon: plasmid pSMR1-7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SULPSESMR1_RS24425 () | 134..460 | + | 327 | WP_005668772.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| SULPSESMR1_RS24430 () | 457..975 | + | 519 | WP_089423630.1 | type II toxin-antitoxin system YhaV family toxin | - |
| SULPSESMR1_RS25315 () | 1070..1234 | + | 165 | WP_198362936.1 | hypothetical protein | - |
| SULPSESMR1_RS24435 () | 1224..1376 | + | 153 | WP_089423631.1 | StaA | - |
| SULPSESMR1_RS24440 () | 1478..5740 | + | 4263 | WP_089423632.1 | strawberry notch family protein | - |
| SULPSESMR1_RS24445 () | 5863..6249 | + | 387 | WP_089423633.1 | hypothetical protein | - |
| SULPSESMR1_RS24450 () | 6251..6712 | + | 462 | WP_089423634.1 | hypothetical protein | - |
| SULPSESMR1_RS24455 () | 6813..7115 | + | 303 | WP_089423635.1 | hypothetical protein | - |
| SULPSESMR1_RS24460 () | 7240..7968 | + | 729 | WP_066010382.1 | DUF736 family protein | - |
| SULPSESMR1_RS24465 () | 8136..10601 | - | 2466 | WP_089423636.1 | S8 family peptidase | - |
| SULPSESMR1_RS24470 () | 10507..11589 | - | 1083 | WP_089423637.1 | ATP-binding protein | - |
| SULPSESMR1_RS24475 () | 12277..13206 | + | 930 | WP_089423638.1 | DUF2493 domain-containing protein | - |
| SULPSESMR1_RS24480 () | 13307..14515 | + | 1209 | WP_089423639.1 | SH3 domain-containing protein | - |
| SULPSESMR1_RS24485 () | 14873..15079 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| SULPSESMR1_RS24490 () | 15643..16236 | + | 594 | WP_089423640.1 | transposase | - |
| SULPSESMR1_RS24495 () | 16223..18556 | + | 2334 | WP_089423641.1 | T-DNA border endonuclease VirD2 | Relaxase |
| SULPSESMR1_RS24500 () | 18565..20568 | + | 2004 | WP_089423642.1 | Protein VirD4 | VF |
| SULPSESMR1_RS24505 () | 20859..23183 | + | 2325 | WP_089423643.1 | AAA family ATPase | - |
| SULPSESMR1_RS24510 () | 23343..24419 | - | 1077 | WP_074840662.1 | hypothetical protein | VF |
| SULPSESMR1_RS24515 () | 24432..24845 | - | 414 | WP_058243507.1 | hypothetical protein | - |
| SULPSESMR1_RS24520 () | 24842..25036 | - | 195 | WP_009807516.1 | hypothetical protein | - |
| SULPSESMR1_RS24525 () | 25033..26019 | - | 987 | WP_089423644.1 | Type IV secretion system protein VirB11 | VF |
| SULPSESMR1_RS24530 () | 26024..27403 | - | 1380 | WP_089423645.1 | Type IV secretion system protein PtlG | VF |
| SULPSESMR1_RS24535 () | 27400..28095 | - | 696 | WP_089423646.1 | Type IV secretion system protein virB9 | VF |
| SULPSESMR1_RS24540 () | 28097..28750 | - | 654 | WP_074647028.1 | type IV secretion system protein | - |
| SULPSESMR1_RS24545 () | 28767..29576 | - | 810 | WP_089423671.1 | conjugal transfer protein TraF | - |
| SULPSESMR1_RS24550 () | 29576..30730 | - | 1155 | WP_198362937.1 | transglycosylase SLT domain-containing protein | - |
| SULPSESMR1_RS25320 () | 30720..30887 | - | 168 | WP_198362938.1 | hypothetical protein | - |
| SULPSESMR1_RS24555 () | 30884..33259 | - | 2376 | WP_089423647.1 | type IV secretion system DNA-binding domain-containing protein | - |
| SULPSESMR1_RS24560 () | 33249..33527 | - | 279 | WP_074647022.1 | VirB3 family type IV secretion system protein | - |
| SULPSESMR1_RS24565 () | 33520..33813 | - | 294 | WP_008282963.1 | Type IV secretion system protein virB2 | VF |
| SULPSESMR1_RS24570 () | 33810..34424 | - | 615 | WP_074647020.1 | lytic transglycosylase domain-containing protein | - |
| SULPSESMR1_RS24575 () | 34468..34836 | - | 369 | WP_089423648.1 | hypothetical protein | - |
| SULPSESMR1_RS24580 () | 35047..35298 | + | 252 | WP_009808055.1 | hypothetical protein | - |
| SULPSESMR1_RS24585 () | 35423..35680 | + | 258 | WP_074647018.1 | helix-turn-helix domain-containing protein | - |
| SULPSESMR1_RS24590 () | 35847..36071 | + | 225 | WP_074647017.1 | hypothetical protein | - |
| SULPSESMR1_RS24595 () | 36174..36563 | - | 390 | WP_089423649.1 | hypothetical protein | - |
| SULPSESMR1_RS24600 () | 37132..37380 | + | 249 | WP_064223258.1 | hypothetical protein | - |
| SULPSESMR1_RS24605 () | 37384..37806 | + | 423 | WP_074647016.1 | type II toxin-antitoxin system VapC family toxin | - |
| SULPSESMR1_RS24610 () | 37803..40526 | + | 2724 | WP_089423650.1 | lactate dehydrogenase | - |
| SULPSESMR1_RS24615 () | 40523..41407 | + | 885 | WP_064223261.1 | hypothetical protein | - |
| SULPSESMR1_RS24620 () | 41550..43022 | + | 1473 | WP_083351912.1 | putative DNA binding domain-containing protein | - |
| SULPSESMR1_RS24625 () | 43198..45246 | + | 2049 | WP_074647012.1 | DEAD/DEAH box helicase | - |
| SULPSESMR1_RS24630 () | 45239..46444 | + | 1206 | WP_074647010.1 | GIY-YIG nuclease family protein | - |
| SULPSESMR1_RS24635 () | 46759..47379 | - | 621 | WP_074647008.1 | TetR/AcrR family transcriptional regulator | - |
| SULPSESMR1_RS24640 () | 47441..48604 | - | 1164 | WP_039965744.1 | ABC transporter substrate-binding protein | - |
| SULPSESMR1_RS24645 () | 48625..50463 | - | 1839 | WP_050757564.1 | long-chain fatty acid--CoA ligase | - |
| SULPSESMR1_RS24650 () | 50469..51239 | - | 771 | WP_009808038.1 | ABC transporter ATP-binding protein | - |
| SULPSESMR1_RS24655 () | 51236..52003 | - | 768 | WP_009808037.1 | ABC transporter ATP-binding protein | - |
| SULPSESMR1_RS24660 () | 52000..53079 | - | 1080 | WP_009808036.1 | branched-chain amino acid ABC transporter permease | - |
| SULPSESMR1_RS24665 () | 53083..53964 | - | 882 | WP_009808035.1 | branched-chain amino acid ABC transporter permease | - |
| SULPSESMR1_RS24670 () | 53961..55076 | - | 1116 | WP_009808034.1 | CoA transferase | - |
| SULPSESMR1_RS24675 () | 55081..55854 | - | 774 | WP_009808033.1 | putative oxidoreductase | VF |
| SULPSESMR1_RS24680 () | 55863..56975 | - | 1113 | WP_114294394.1 | acyl-CoA dehydrogenase family protein | - |
| SULPSESMR1_RS24685 () | 57009..58247 | - | 1239 | WP_009808031.1 | thiolase family protein | - |
| SULPSESMR1_RS24690 () | 58260..59048 | - | 789 | WP_009808030.1 | enoyl-CoA hydratase/isomerase family protein | - |
| SULPSESMR1_RS24695 () | 59260..60060 | - | 801 | WP_009808029.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| SULPSESMR1_RS24700 () | 60072..61256 | - | 1185 | WP_009808028.1 | lipid-transfer protein | - |
| SULPSESMR1_RS24705 () | 61272..62780 | - | 1509 | WP_074647007.1 | AMP-binding protein | - |
| SULPSESMR1_RS24710 () | 62792..64342 | - | 1551 | WP_067296559.1 | AMP-binding protein | - |
| SULPSESMR1_RS24715 () | 64394..65095 | - | 702 | WP_176832926.1 | ABC transporter ATP-binding protein | - |
| SULPSESMR1_RS24720 () | 65092..65841 | - | 750 | WP_064223626.1 | ABC transporter ATP-binding protein | - |
| SULPSESMR1_RS24725 () | 65838..66773 | - | 936 | WP_089423673.1 | branched-chain amino acid ABC transporter permease | - |
| SULPSESMR1_RS24730 () | 66785..67642 | - | 858 | WP_064223625.1 | branched-chain amino acid ABC transporter permease | - |
| SULPSESMR1_RS24735 () | 67727..68911 | - | 1185 | WP_067296557.1 | ABC transporter substrate-binding protein | - |
| SULPSESMR1_RS24740 () | 69247..70296 | + | 1050 | WP_089423652.1 | AraC family transcriptional regulator | - |
| SULPSESMR1_RS24745 () | 70348..70731 | + | 384 | WP_064223622.1 | MerR family transcriptional regulator | - |
| SULPSESMR1_RS24750 () | 70937..71284 | - | 348 | WP_083351911.1 | hypothetical protein | - |
| SULPSESMR1_RS24755 () | 71465..72811 | + | 1347 | WP_078543006.1 | ISKra4 family transposase ISSusp3 | Transposase |
| SULPSESMR1_RS24765 () | 73303..74094 | - | 792 | WP_089423653.1 | hypothetical protein | - |
| SULPSESMR1_RS24770 () | 74167..75303 | + | 1137 | WP_089423654.1 | exonuclease SbcCD subunit D | - |
| SULPSESMR1_RS24775 () | 75300..78380 | + | 3081 | WP_089423655.1 | SMC family ATPase | - |
| SULPSESMR1_RS24780 () | 78841..79908 | - | 1068 | WP_198362935.1 | hypothetical protein | - |
| SULPSESMR1_RS24785 () | 80136..81029 | + | 894 | WP_089423657.1 | Tn3 family transposase ISPsy42 | Transposase |
| SULPSESMR1_RS24790 () | 81091..81486 | - | 396 | WP_089423658.1 | PIN domain-containing protein | Toxin Detail |
| SULPSESMR1_RS24795 () | 81476..81703 | - | 228 | WP_089423659.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SULPSESMR1_RS24800 () | 81941..83128 | + | 1188 | WP_055687614.1 | Sporulation initiation inhibitor protein Soj | VF |
| SULPSESMR1_RS24805 () | 83125..84141 | + | 1017 | WP_089423660.1 | plasmid partitioning protein RepB | - |
| SULPSESMR1_RS24810 () | 84319..85539 | + | 1221 | WP_089423661.1 | replication initiation protein RepC | - |
| SULPSESMR1_RS24815 () | 85675..86877 | - | 1203 | WP_089423662.1 | Fic family protein | - |
| SULPSESMR1_RS24825 () | 87156..87641 | + | 486 | WP_089423664.1 | hypothetical protein | - |
| SULPSESMR1_RS24830 () | 87682..88623 | + | 942 | WP_089423665.1 | DUF1738 domain-containing protein | - |
| SULPSESMR1_RS24835 () | 88647..88856 | + | 210 | WP_089423666.1 | hypothetical protein | - |
| SULPSESMR1_RS24840 () | 88945..89334 | + | 390 | WP_089423667.1 | DUF3768 domain-containing protein | - |
| SULPSESMR1_RS24845 () | 89492..91474 | + | 1983 | WP_089423668.1 | ParB/RepB/Spo0J family partition protein | - |
| SULPSESMR1_RS24850 () | 91551..92144 | + | 594 | WP_089423669.1 | regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|