MGE detailed information
MGE type: Genomic_island MGE length: 15649 bp
Accession: NZ_CP022411 Location: 2906945..2922593 Organism: Pseudomonas sp. RU47 Replicon: chromosome
Accession: NZ_CP022411 Location: 2906945..2922593 Organism: Pseudomonas sp. RU47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCX46_RS13165 () | 2902356..2903378 | + | 1023 | WP_127927085.1 | acyltransferase | - |
| CCX46_RS13170 () | 2903436..2904020 | + | 585 | WP_007912592.1 | Fe-S biogenesis protein NfuA | - |
| CCX46_RS13175 () | 2904165..2904911 | - | 747 | WP_127927087.1 | precorrin-4 C(11)-methyltransferase | - |
| CCX46_RS13180 () | 2904993..2905406 | - | 414 | WP_127927090.1 | cobalamin biosynthesis protein | - |
| CCX46_RS13185 () | 2905403..2906104 | - | 702 | WP_127927092.1 | CbtA family protein | - |
| CCX46_RS13190 () | 2906116..2906313 | - | 198 | WP_122844784.1 | CbtB-domain containing protein | - |
| CCX46_RS13200 () | 2907899..2908990 | + | 1092 | WP_177413858.1 | cobalamin biosynthesis protein CobW | - |
| CCX46_RS13205 () | 2908993..2912841 | + | 3849 | WP_127927097.1 | cobaltochelatase subunit CobN | - |
| CCX46_RS13210 () | 2913067..2914068 | + | 1002 | WP_127927099.1 | AAA family ATPase | - |
| CCX46_RS13215 () | 2914050..2914733 | + | 684 | WP_177413901.1 | VWA domain-containing protein | - |
| CCX46_RS13220 () | 2914908..2916554 | + | 1647 | WP_127927103.1 | phospholipase | - |
| CCX46_RS13225 () | 2916615..2919251 | + | 2637 | WP_127927105.1 | hypothetical protein | - |
| CCX46_RS13230 () | 2919710..2921269 | + | 1560 | WP_127927107.1 | TerC family protein | - |
| CCX46_RS13235 () | 2921565..2921813 | + | 249 | WP_038368375.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CCX46_RS13240 () | 2921803..2922084 | + | 282 | WP_127927109.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCX46_RS13245 () | 2922126..2922593 | - | 468 | WP_127927111.1 | hypothetical protein | - |
| CCX46_RS13250 () | 2922650..2923081 | - | 432 | WP_127927113.1 | thioredoxin family protein | - |
| CCX46_RS13255 () | 2923250..2923576 | - | 327 | WP_127927115.1 | hypothetical protein | - |
| CCX46_RS13260 () | 2924001..2924849 | + | 849 | WP_064117896.1 | transporter substrate-binding domain-containing protein | - |
| CCX46_RS13265 () | 2924901..2925563 | + | 663 | WP_038368362.1 | amino acid ABC transporter permease | - |
| CCX46_RS13270 () | 2925573..2926235 | + | 663 | WP_127927117.1 | amino acid ABC transporter permease | - |
| CCX46_RS13275 () | 2926232..2927023 | + | 792 | WP_127927119.1 | amino acid ABC transporter ATP-binding protein | - |
| CCX46_RS13280 () | 2927053..2927442 | + | 390 | WP_003225452.1 | RidA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|